RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
CTSA-202ENST00000354880 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 GNAQP50148 359 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 JAG1P78504 1218 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 WASF1Q92558 559 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 MKL1Q969V6 931 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 ALG1Q9BT22 464 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 DEXIO95424 95 aa18.11■□□□□ 0.49
CTSA-202ENST00000354880 EEF2P13639 858 aaKnown RBP18.11■□□□□ 0.49
CTSA-202ENST00000354880 FOSBP53539 338 aa18.11■□□□□ 0.49
CTSA-202ENST00000354880 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
CTSA-202ENST00000354880 NBPF12Q5TAG4 269 aaPredicted RBP18.11■□□□□ 0.49
CTSA-202ENST00000354880 STAG2Q8N3U4 1231 aa18.11■□□□□ 0.49
CTSA-202ENST00000354880 SRBD1Q8N5C6 995 aaKnown RBP18.11■□□□□ 0.49
CTSA-202ENST00000354880 POLR2AP24928 1970 aaKnown RBP18.11■□□□□ 0.49
CTSA-202ENST00000354880 MYH6P13533 1939 aa18.11■□□□□ 0.49
CTSA-202ENST00000354880 PALM3A6NDB9 673 aaPredicted RBP18.1■□□□□ 0.49
CTSA-202ENST00000354880 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
CTSA-202ENST00000354880 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
CTSA-202ENST00000354880 CAP2P40123 477 aa18.1■□□□□ 0.49
CTSA-202ENST00000354880 FBXO18Q8NFZ0 1043 aa18.1■□□□□ 0.49
CTSA-202ENST00000354880 HOOK2Q96ED9 719 aa18.1■□□□□ 0.49
CTSA-202ENST00000354880 AIFM3Q96NN9 605 aa18.1■□□□□ 0.49
CTSA-202ENST00000354880 CNTNAP5Q8WYK1 1306 aa18.1■□□□□ 0.49
CTSA-202ENST00000354880 PRPF3O43395 683 aaKnown RBP18.09■□□□□ 0.49
CTSA-202ENST00000354880 PDHBP11177 359 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 USP50Q70EL3 339 aaPredicted RBP18.09■□□□□ 0.49
CTSA-202ENST00000354880 RASGRP2Q7LDG7 609 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 SIAH1Q8IUQ4 282 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 RGS22Q8NE09 1264 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 ZBTB21Q9ULJ3 1066 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 ATP6V1DQ9Y5K8 247 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 BAZ2BQ9UIF8 2168 aaKnown RBP18.09■□□□□ 0.49
CTSA-202ENST00000354880 USP17L5A8MUK1 530 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 PHF20L1A8MW92 1017 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 UBE2Q2LH0YL09 131 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 EPHX2P34913 555 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 DCAF15Q66K64 600 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 USP17L2Q6R6M4 530 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 DCPSQ96C86 337 aaKnown RBP18.09■□□□□ 0.49
CTSA-202ENST00000354880 LZTS2Q9BRK4 669 aa18.09■□□□□ 0.49
CTSA-202ENST00000354880 V9GY48 417 aaPredicted RBP18.09■□□□□ 0.49
CTSA-202ENST00000354880 SCN4AP35499 1836 aa18.08■□□□□ 0.49
CTSA-202ENST00000354880 KLRF2D3W0D1 207 aa18.08■□□□□ 0.48
CTSA-202ENST00000354880 GOLGA8HP0CJ92 632 aa18.08■□□□□ 0.48
CTSA-202ENST00000354880 MCM4P33991 863 aa18.08■□□□□ 0.48
CTSA-202ENST00000354880 IQCA1LA6NCM1 817 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 ASNSP08243 561 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 ASPRV1Q53RT3 343 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 PRAMEF18Q5VWM3 479 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 GJB4Q9NTQ9 266 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 RBM27Q9P2N5 1060 aaKnown RBP18.07■□□□□ 0.48
CTSA-202ENST00000354880 TRIM29Q14134 588 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 PKN1Q16512 942 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 FOXD4L6Q3SYB3 417 aaPredicted RBP18.07■□□□□ 0.48
CTSA-202ENST00000354880 FOXD4L3Q6VB84 417 aaPredicted RBP18.07■□□□□ 0.48
CTSA-202ENST00000354880 SULF1Q8IWU6 871 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 ZNF341Q9BYN7 854 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 ZSCAN16Q9H4T2 348 aaPredicted RBP18.07■□□□□ 0.48
CTSA-202ENST00000354880 SYNPO2Q9UMS6 1093 aa18.07■□□□□ 0.48
CTSA-202ENST00000354880 hCG_1642624A0A1W2PR95 340 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 KRT40Q6A162 431 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 MCTP1Q6DN14 999 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 ZC3H15Q8WU90 426 aaKnown RBP18.06■□□□□ 0.48
CTSA-202ENST00000354880 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 GINM1Q9NU53 330 aa18.06■□□□□ 0.48
CTSA-202ENST00000354880 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 CYTH3O43739 400 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 CTNND1O60716 968 aaKnown RBP18.05■□□□□ 0.48
CTSA-202ENST00000354880 ZNF543Q08ER8 600 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 RESTQ13127 1097 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
CTSA-202ENST00000354880 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 CHAMP1Q96JM3 812 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 TAF1DQ9H5J8 278 aaPredicted RBP18.05■□□□□ 0.48
CTSA-202ENST00000354880 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
CTSA-202ENST00000354880 WDR90Q96KV7 1748 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 A0A1W2PRG0 241 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 F5H6K3 240 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 RAD21O60216 631 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 XBP1P17861 261 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 KLRC3Q07444 240 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 NBR1Q14596 966 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 SLFN13Q68D06 897 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 DCAF4Q8WV16 495 aa18.05■□□□□ 0.48
CTSA-202ENST00000354880 TCHHQ07283 1943 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 POTECB2RU33 542 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 SLC1A4P43007 532 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 PFKFB3Q16875 520 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms