RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 NBPF4Q96M43 638 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 DBNLQ9UJU6 430 aaKnown RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 SIPA1L3O60292 1781 aaPredicted RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 LTN1O94822 1766 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 CARMIL3Q8ND23 1372 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 KIAA1551Q9HCM1 1747 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 NPHP1O15259 732 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 DPEP1P16444 411 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 MAP3K12Q12852 859 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 STK38Q15208 465 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 HOMER1Q86YM7 354 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 KBTBD3Q8NAB2 608 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 MPHOSPH8Q99549 860 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 LRRC2Q9BYS8 371 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 SIL1Q9H173 461 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 COL5A2P05997 1499 aaPredicted RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 SBF1O95248 1867 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 A0A1B0GVL5 298 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 NEURL1BA8MQ27 555 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 SPTLC2O15270 562 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 ZSCAN12O43309 604 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 FDPSP14324 419 aaKnown RBP8.62□□□□□ -1.03
C11orf54-202ENST00000354421 CMA1P23946 247 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 GCKRQ14397 625 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 CC2D1AQ6P1N0 951 aaPredicted RBP8.62□□□□□ -1.03
C11orf54-202ENST00000354421 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 GPR161Q8N6U8 529 aaKnown RBP8.62□□□□□ -1.03
C11orf54-202ENST00000354421 SEC62Q99442 399 aaKnown RBP8.62□□□□□ -1.03
C11orf54-202ENST00000354421 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 PSD3Q9NYI0 1048 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 TUBE1Q9UJT0 475 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 PIEZO1Q92508 2521 aa8.62□□□□□ -1.03
C11orf54-202ENST00000354421 FAM237AA0A1B0GTK4 181 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 E7EWF7 191 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 H3BM21 787 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 URI1O94763 535 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 ZNF202O95125 648 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 TBC1D8O95759 1140 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 LMNB1P20700 586 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 CCT2P78371 535 aaKnown RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 TFCP2Q12800 502 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 RABL6Q3YEC7 729 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 ZMYM1Q5SVZ6 1142 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 AXDND1Q5T1B0 1012 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 MPRIPQ6WCQ1 1025 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 RSRC2Q7L4I2 434 aaKnown RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 VSTM4Q8IW00 320 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 TMEM151AQ8N4L1 468 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 ABTB2Q8N961 1025 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 IPO4Q8TEX9 1081 aaKnown RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 ERCC4Q92889 916 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 METTL22Q9BUU2 404 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 CARD6Q9BX69 1037 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 KRTAP9-2Q9BYQ4 174 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 HSD3B7Q9H2F3 369 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 FEZ2Q9UHY8 353 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-202ENST00000354421 CLIC4Q9Y696 253 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
C11orf54-202ENST00000354421 ARHGAP6O43182 974 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 GUCY1B3Q02153 619 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 NEXNQ0ZGT2 675 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 GPS2Q13227 327 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 GORABQ5T7V8 394 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 JAKMIP3Q5VZ66 844 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 TMEM139Q8IV31 216 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 RABGGTAQ92696 567 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 DBNDD2Q9BQY9 259 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 NCOA5Q9HCD5 579 aaKnown RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 CPDO75976 1380 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 VWA3AA6NCI4 1184 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 FANCGO15287 622 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 SEC31AO94979 1220 aaKnown RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 PFKFB1P16118 471 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 UBASH3AP57075 661 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 MYL5Q02045 173 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 TBX2Q13207 712 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 C1orf141Q5JVX7 400 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 ANO1Q5XXA6 986 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 MSL3Q8N5Y2 521 aaKnown RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 IQUBQ8NA54 791 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 ANKRD24Q8TF21 1146 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 SYTL4Q96C24 671 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-202ENST00000354421 GPR108Q9NPR9 543 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 HPSEQ9Y251 543 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms