RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 RBM28Q9NW13 759 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-202ENST00000347545 ZSCAN12O43309 604 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 KCNQ4P56696 695 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 MECOMQ03112 1051 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 E2F4Q16254 413 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 ST7Q9NRC1 585 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 DDAH1O94760 285 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 ATP2C1P98194 919 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 ZNF771Q7L3S4 317 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 MRPL44Q9H9J2 332 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-202ENST00000347545 A0A0U1RQJ8 604 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 COBLO75128 1261 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 ADAMTS2O95450 1211 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 KLHL10Q6JEL2 608 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 ATRIPQ8WXE1 791 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 STAMQ92783 540 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 MTRQ99707 1265 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 CARD6Q9BX69 1037 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 XBP1P17861 261 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 PTGDRQ13258 359 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 ADD3Q9UEY8 706 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 ORC4O43929 436 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
ARHGEF1-202ENST00000347545 SOWAHDA6NJG2 315 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 CALM1P0DP23 149 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 CALM2P0DP24 149 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 CALM3P0DP25 149 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 RBL2Q08999 1139 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 PDXDC2PQ6P474 469 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-202ENST00000347545 MYH1P12882 1939 aa16.52■□□□□ 0.24
ARHGEF1-202ENST00000347545 PRDX5P30044 214 aa16.52■□□□□ 0.24
ARHGEF1-202ENST00000347545 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
ARHGEF1-202ENST00000347545 GABPB1Q06547 395 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF1-202ENST00000347545 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
ARHGEF1-202ENST00000347545 TFCP2L1Q9NZI6 479 aa16.52■□□□□ 0.24
ARHGEF1-202ENST00000347545 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 GNG11P61952 73 aa16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 GSDMAQ96QA5 445 aa16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 IRX2Q9BZI1 471 aaPredicted RBP16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 BLZF1Q9H2G9 400 aa16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
ARHGEF1-202ENST00000347545 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■□□ 15.3
ARHGEF1-202ENST00000347545 KARSQ15046 597 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 CT47A1Q5JQC4 288 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 PANX2Q96RD6 677 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 MRFAP1Q9Y605 127 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 AKR1B15C9JRZ8 316 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 KIF20AO95235 890 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 SCG2P13521 617 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 IRS2Q9Y4H2 1338 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 TXNRD3Q86VQ6 643 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 CTNND2Q9UQB3 1225 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
ARHGEF1-202ENST00000347545 EFCAB8A8MWE9 144 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 BMP15O95972 392 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 PFKFB3Q16875 520 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 C4orf32Q8N8J7 132 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 SRRTQ9BXP5 876 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 CASQ1P31415 396 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 JAG2Q9Y219 1238 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
ARHGEF1-202ENST00000347545 VGLL3A8MV65 326 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 SEMA3EO15041 775 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 PNMA6AP0CW24 399 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 SLC4A8Q2Y0W8 1093 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 UBXN4Q92575 508 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 GOLGA6L9A6NEM1 432 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 MFAP3LO75121 409 aa16.49■□□□□ 0.23
ARHGEF1-202ENST00000347545 GYPCP04921 128 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms