RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SARNPP82979 210 aaKnown RBP25.54■■□□□ 1.68
NPAS3-201ENST00000346562 RPS6KA1Q15418 735 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 FLAD1Q8NFF5 587 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 MCUR1Q96AQ8 359 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 METTL13Q8N6R0 699 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 TNNC2P02585 160 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 KLHDC4Q8TBB5 520 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 ZNF202O95125 648 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 PEX26Q7Z412 305 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 MYL10Q9BUA6 226 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 A1BGP04217 495 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 PAK2Q13177 524 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 FAM227BQ96M60 508 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 CFAP221Q4G0U5 840 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 PCDHB13Q9Y5F0 798 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 ZAP70P43403 619 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 KRT81Q14533 505 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 FAM47CQ5HY64 1035 aa25.53■■□□□ 1.68
NPAS3-201ENST00000346562 PAGR1Q9BTK6 254 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 DSCC1Q9BVC3 393 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 OGFRQ9NZT2 677 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 SMCO2A6NFE2 343 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 P3H4Q92791 437 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 ANO3Q9BYT9 981 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 MRPL11Q9Y3B7 192 aaKnown RBP25.52■■□□□ 1.68
NPAS3-201ENST00000346562 KLHL7Q8IXQ5 586 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 PHKBQ93100 1093 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 RBSNQ9H1K0 784 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 RAD51AP2Q09MP3 1159 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 MCF2L2Q86YR7 1114 aa25.52■■□□□ 1.68
NPAS3-201ENST00000346562 TRIM50Q86XT4 487 aa25.51■■□□□ 1.67
NPAS3-201ENST00000346562 GOLGA5Q8TBA6 731 aa25.51■■□□□ 1.67
NPAS3-201ENST00000346562 RSAD2Q8WXG1 361 aa25.51■■□□□ 1.67
NPAS3-201ENST00000346562 FAM193BQ96PV7 902 aaPredicted RBP25.51■■□□□ 1.67
NPAS3-201ENST00000346562 RAB20Q9NX57 234 aa25.51■■□□□ 1.67
NPAS3-201ENST00000346562 TESPA1A2RU30 521 aaPredicted RBP25.51■■□□□ 1.67
NPAS3-201ENST00000346562 STAM2O75886 525 aa25.51■■□□□ 1.67
NPAS3-201ENST00000346562 FEZ2Q9UHY8 353 aaPredicted RBP25.51■■□□□ 1.67
NPAS3-201ENST00000346562 N4BP1O75113 896 aaKnown RBP25.51■■□□□ 1.67
NPAS3-201ENST00000346562 SLFN12Q8IYM2 578 aa25.51■■□□□ 1.67
NPAS3-201ENST00000346562 USP19O94966 1318 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 KRT15P19012 456 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 ARHGAP44Q17R89 818 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 DPY19L2Q6NUT2 758 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 SEPT14Q6ZU15 432 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 VPS37BQ9H9H4 285 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 LIG4P49917 911 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 POLR2MP0CAP2 368 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 MAN1A1P33908 653 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 FAM47AQ5JRC9 791 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 SGSM2O43147 1006 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 PDZD4Q76G19 769 aaPredicted RBP25.5■■□□□ 1.67
NPAS3-201ENST00000346562 ADPGKQ9BRR6 497 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 KCNJ14Q9UNX9 436 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 IL13P35225 146 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 LMNTD2Q8IXW0 634 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 RAB17Q9H0T7 212 aa25.5■■□□□ 1.67
NPAS3-201ENST00000346562 TBC1D8O95759 1140 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 LSM14BQ9BX40 385 aaKnown RBP25.49■■□□□ 1.67
NPAS3-201ENST00000346562 MIS12Q9H081 205 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 CTSWP56202 376 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 GTF2IP78347 998 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 PLCB4Q15147 1175 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 TRAPPC8Q9Y2L5 1435 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 KDM2BQ8NHM5 1336 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 ERVV-2B6SEH9 535 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 MUM1L1Q5H9M0 696 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 DNAJC10Q8IXB1 793 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 ZNF277Q9NRM2 450 aaPredicted RBP25.49■■□□□ 1.67
NPAS3-201ENST00000346562 ATP2B4P23634 1241 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 MFSD14BQ5SR56 506 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 GPBP1Q86WP2 473 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 RTEL1Q9NZ71 1219 aa25.49■■□□□ 1.67
NPAS3-201ENST00000346562 GRK7Q8WTQ7 553 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 HADHQ16836 314 aaKnown RBP25.48■■□□□ 1.67
NPAS3-201ENST00000346562 HAUS1Q96CS2 278 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 CEP120Q8N960 986 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 AMFRQ9UKV5 643 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 CAPN9O14815 690 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 PFDN6O15212 129 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 ZNF75DP51815 510 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 GADL1Q6ZQY3 521 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 ARHGEF2Q92974 986 aaKnown RBP25.48■■□□□ 1.67
NPAS3-201ENST00000346562 LONRF2Q1L5Z9 754 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 OTUD7BQ6GQQ9 843 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 BCAP29Q9UHQ4 241 aa25.48■■□□□ 1.67
NPAS3-201ENST00000346562 COL17A1Q9UMD9 1497 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-201ENST00000346562 PSMD6Q15008 389 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 VSIG1Q86XK7 387 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.47■■□□□ 1.67
NPAS3-201ENST00000346562 UIMC1Q96RL1 719 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 BLZF1Q9H2G9 400 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 VPS54Q9P1Q0 977 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 ZBTB9Q96C00 473 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 ST7Q9NRC1 585 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 NFE2L3Q9Y4A8 694 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 NDUFAB1O14561 156 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 ARHGAP6O43182 974 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 LRMPQ12912 555 aa25.47■■□□□ 1.67
NPAS3-201ENST00000346562 RNF169Q8NCN4 708 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms