RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TTC39AQ5SRH9 613 aa20.05■□□□□ 0.8
NECTIN1-202ENST00000340882 MIGA1Q8NAN2 632 aa20.05■□□□□ 0.8
NECTIN1-202ENST00000340882 CHD9Q3L8U1 2897 aa20.05■□□□□ 0.8
NECTIN1-202ENST00000340882 A0A1W2PRG0 241 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 GNAI3P08754 354 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 ERCC3P19447 782 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 CYP7A1P22680 504 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 DNAJB2P25686 324 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 SHMT1P34896 483 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 EVX2Q03828 476 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 G3BP1Q13283 466 aaKnown RBP eCLIP20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 KIAA1755Q5JYT7 1200 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 ATF7IPQ6VMQ6 1270 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 SPATC1LQ9H0A9 340 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 SERPINB13Q9UIV8 391 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 TNNQ9UQP3 1299 aa20.04■□□□□ 0.8
NECTIN1-202ENST00000340882 CLTBP09497 229 aa20.03■□□□□ 0.8
NECTIN1-202ENST00000340882 PLCD1P51178 756 aa20.03■□□□□ 0.8
NECTIN1-202ENST00000340882 EHD4Q9H223 541 aa20.03■□□□□ 0.8
NECTIN1-202ENST00000340882 PHF24Q9UPV7 400 aa20.03■□□□□ 0.8
NECTIN1-202ENST00000340882 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
NECTIN1-202ENST00000340882 REV3LO60673 3130 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 KIAA0355O15063 1070 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 STRNO43815 780 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 COG2Q14746 738 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 SEPT2Q15019 361 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 TNNI3KQ59H18 835 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 MAML3Q96JK9 1138 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 FPGT-TNNI3KV9GXZ4 949 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 NAV1Q8NEY1 1877 aa20.02■□□□□ 0.8
NECTIN1-202ENST00000340882 NCOR1O75376 2440 aa20.01■□□□□ 0.79
NECTIN1-202ENST00000340882 PGK1P00558 417 aa20.01■□□□□ 0.79
NECTIN1-202ENST00000340882 USP5P45974 858 aa20.01■□□□□ 0.79
NECTIN1-202ENST00000340882 PPM1EQ8WY54 764 aa20.01■□□□□ 0.79
NECTIN1-202ENST00000340882 ZNF576Q9H609 170 aa20.01■□□□□ 0.79
NECTIN1-202ENST00000340882 GBF1Q92538 1859 aa20.01■□□□□ 0.79
NECTIN1-202ENST00000340882 PQBP1O60828 265 aaKnown RBP20■□□□□ 0.79
NECTIN1-202ENST00000340882 RAG1P15918 1043 aa20■□□□□ 0.79
NECTIN1-202ENST00000340882 FPGSQ05932 587 aa20■□□□□ 0.79
NECTIN1-202ENST00000340882 CCDC158Q5M9N0 1113 aa20■□□□□ 0.79
NECTIN1-202ENST00000340882 SHCBP1Q8NEM2 672 aa20■□□□□ 0.79
NECTIN1-202ENST00000340882 LENG1Q96BZ8 264 aaPredicted RBP20■□□□□ 0.79
NECTIN1-202ENST00000340882 CABP5Q9NP86 173 aa20■□□□□ 0.79
NECTIN1-202ENST00000340882 XPNPEP3Q9NQH7 507 aa20■□□□□ 0.79
NECTIN1-202ENST00000340882 TLR7Q9NYK1 1049 aaKnown RBP20■□□□□ 0.79
NECTIN1-202ENST00000340882 TCF20Q9UGU0 1960 aaKnown RBP19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 A0A1W2PQ45 241 aaPredicted RBP19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 A0A1W2PQY0 241 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 GRXCR1A8MXD5 290 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 TAL1P17542 331 aaPredicted RBP19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 PBX2P40425 430 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 FAAP100Q0VG06 881 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 TANGO6Q9C0B7 1094 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 GPR108Q9NPR9 543 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 HOXC10Q9NYD6 342 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 MYH8P13535 1937 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 BDP1A6H8Y1 2624 aa19.99■□□□□ 0.79
NECTIN1-202ENST00000340882 IDH1O75874 414 aaKnown RBP19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 GNAI2P04899 355 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 PLS1Q14651 629 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 NCAPG2Q86XI2 1143 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 MAGEB6Q8N7X4 407 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 TIFAQ96CG3 184 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 ATG4CQ96DT6 458 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 ZNF512BQ96KM6 892 aaPredicted RBP19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 TMEM39AQ9NV64 488 aa19.98■□□□□ 0.79
NECTIN1-202ENST00000340882 DSG3P32926 999 aa19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 RARSP54136 660 aaKnown RBP19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 GABPAQ06546 454 aa19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 C16orf59Q7L2K0 433 aa19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 TTC6Q86TZ1 520 aa19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 ANTXR1Q9H6X2 564 aa19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 DBNLQ9UJU6 430 aaKnown RBP19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 CHD7Q9P2D1 2997 aa19.97■□□□□ 0.79
NECTIN1-202ENST00000340882 RARBP10826 455 aa19.96■□□□□ 0.79
NECTIN1-202ENST00000340882 CLEC10AQ8IUN9 316 aa19.96■□□□□ 0.79
NECTIN1-202ENST00000340882 ABRAQ8N0Z2 381 aa19.96■□□□□ 0.79
NECTIN1-202ENST00000340882 PRDM12Q9H4Q4 367 aa19.96■□□□□ 0.79
NECTIN1-202ENST00000340882 MROH8Q9H579 483 aa19.96■□□□□ 0.79
NECTIN1-202ENST00000340882 PGK2P07205 417 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 POLA2Q14181 598 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 ADGRE1Q14246 886 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 SIAH1Q8IUQ4 282 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 ADAMTS19Q8TE59 1207 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 ASB2Q96Q27 587 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 PBX4Q9BYU1 374 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 CCDC8Q9H0W5 538 aaPredicted RBP19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 SLC5A4Q9NY91 659 aa19.95■□□□□ 0.78
NECTIN1-202ENST00000340882 MPHOSPH10O00566 681 aaKnown RBP19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 ADAMTS4O75173 837 aa19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 ZNF865P0CJ78 1059 aaPredicted RBP19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 TMEM132BQ14DG7 1078 aa19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 ANKRD33Q7Z3H0 272 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms