RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 NELFBQ8WX92 580 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 LPIN2Q92539 896 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SCARB1-202ENST00000339570 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 XBP1P17861 261 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 CNNM2Q9H8M5 875 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 ERVV-2B6SEH9 535 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 MYO1CO00159 1063 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 ERLIN1O75477 346 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 CASP8Q14790 479 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 CEP112Q8N8E3 955 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-202ENST00000339570 SCN11AQ9UI33 1791 aa18.22■□□□□ 0.51
SCARB1-202ENST00000339570 PPP1R3GB7ZBB8 358 aa18.22■□□□□ 0.51
SCARB1-202ENST00000339570 UQCRFS1P1P0C7P4 283 aa18.22■□□□□ 0.51
SCARB1-202ENST00000339570 CCDC196A0A1B0GTZ2 297 aa18.22■□□□□ 0.51
SCARB1-202ENST00000339570 ZNF185O15231 689 aa18.22■□□□□ 0.51
SCARB1-202ENST00000339570 CYP27A1Q02318 531 aa18.22■□□□□ 0.51
SCARB1-202ENST00000339570 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-202ENST00000339570 KLK7P49862 253 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 KANK3Q6NY19 840 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 APTXQ7Z2E3 356 aaKnown RBP18.21■□□□□ 0.51
SCARB1-202ENST00000339570 KIAA1328Q86T90 577 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-202ENST00000339570 FAM170AA1A519 330 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 KCNJ18B7U540 433 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 KCNJ12Q14500 433 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 VGLL2Q8N8G2 317 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 PANX2Q96RD6 677 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 UIMC1Q96RL1 719 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 ABHD10Q9NUJ1 306 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
SCARB1-202ENST00000339570 SLIT3O75094 1523 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
SCARB1-202ENST00000339570 CATIPQ7Z7H3 387 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 CNGA4Q8IV77 575 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 DUSP10Q9Y6W6 482 aa18.21■□□□□ 0.51
SCARB1-202ENST00000339570 FAM237AA0A1B0GTK4 181 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 PDE8AO60658 829 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 CCDC122Q5T0U0 273 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 FAM204AQ9H8W3 233 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 MYO6Q9UM54 1294 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 ERCC5P28715 1186 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-202ENST00000339570 HSPA2P54652 639 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 EIF5P55010 431 aaKnown RBP18.2■□□□□ 0.5
SCARB1-202ENST00000339570 BRD3Q15059 726 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-202ENST00000339570 ESR2Q92731 530 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 RRP15Q9Y3B9 282 aaKnown RBP18.2■□□□□ 0.5
SCARB1-202ENST00000339570 EIF3JO75822 258 aaKnown RBP18.2■□□□□ 0.5
SCARB1-202ENST00000339570 SMCR8Q8TEV9 937 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-202ENST00000339570 BRMS1Q9HCU9 246 aa18.2■□□□□ 0.5
SCARB1-202ENST00000339570 XDHP47989 1333 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 WDR19Q8NEZ3 1342 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 ZPR1O75312 459 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 ATP1A1P05023 1023 aaKnown RBP18.19■□□□□ 0.5
SCARB1-202ENST00000339570 PAK1Q13153 545 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 TSR1Q2NL82 804 aaKnown RBP18.19■□□□□ 0.5
SCARB1-202ENST00000339570 ANKRD20A12PQ8NF67 263 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 SMARCAL1Q9NZC9 954 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 TTC26A0AVF1 554 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 PKN1Q16512 942 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 GOLGA6L1Q8N7Z2 621 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 TRIM47Q96LD4 638 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 MMS19Q96T76 1030 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 RASSF4Q9H2L5 321 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
SCARB1-202ENST00000339570 CWC15Q9P013 229 aaKnown RBP18.19■□□□□ 0.5
SCARB1-202ENST00000339570 MYH8P13535 1937 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 WDR17Q8IZU2 1322 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 CYP2D6P10635 497 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 ACTN2P35609 894 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 PRCPP42785 496 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 KCNQ4P56696 695 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 SLC4A9Q96Q91 983 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 USP17L12C9JPN9 530 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 USP17L21D6R901 530 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 PMS1P54277 932 aaKnown RBP18.18■□□□□ 0.5
SCARB1-202ENST00000339570 RASGRP2Q7LDG7 609 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 HPS3Q969F9 1004 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 STAT6P42226 847 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 MTRQ99707 1265 aa18.18■□□□□ 0.5
SCARB1-202ENST00000339570 EPN1Q9Y6I3 576 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-202ENST00000339570 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-202ENST00000339570 CXCR5P32302 372 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
SCARB1-202ENST00000339570 NT5DC1Q5TFE4 455 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 CYP26C1Q6V0L0 522 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 TRIML1Q8N9V2 468 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 CTAGE1Q96RT6 745 aa18.17■□□□□ 0.5
SCARB1-202ENST00000339570 ZSCAN10Q96SZ4 725 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-202ENST00000339570 AATFQ9NY61 560 aaKnown RBP eCLIP18.17■□□□□ 0.56e-8■■■□□ 16.7
SCARB1-202ENST00000339570 L1RE1Q9UN81 338 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms