RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 SUPT20HQ8NEM7 779 aa22.15■■□□□ 1.14
CHMP6-201ENST00000325167 FAM13BQ9NYF5 915 aa22.15■■□□□ 1.14
CHMP6-201ENST00000325167 SWAP70Q9UH65 585 aa22.15■■□□□ 1.14
CHMP6-201ENST00000325167 FOCADQ5VW36 1801 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 TRIM75PA6NK02 468 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 SMARCA1P28370 1054 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 TOB1P50616 345 aaPredicted RBP22.14■■□□□ 1.14
CHMP6-201ENST00000325167 PPP4R3BQ5MIZ7 849 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 GALNT17Q6IS24 598 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 CEP57L1Q8IYX8 460 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 RRAGDQ9NQL2 400 aaPredicted RBP22.14■■□□□ 1.14
CHMP6-201ENST00000325167 KIAA1468Q9P260 1216 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 PLIN4Q96Q06 1357 aa22.14■■□□□ 1.14
CHMP6-201ENST00000325167 GOLGA6L6A8MZA4 724 aa22.14■■□□□ 1.13
CHMP6-201ENST00000325167 GOLGA6L19H0YKK7 550 aa22.14■■□□□ 1.13
CHMP6-201ENST00000325167 PTPREP23469 700 aa22.14■■□□□ 1.13
CHMP6-201ENST00000325167 STRIP1Q5VSL9 837 aa22.14■■□□□ 1.13
CHMP6-201ENST00000325167 TOP1P11387 765 aaKnown RBP22.13■■□□□ 1.13
CHMP6-201ENST00000325167 NOVP48745 357 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 NR5A1Q13285 461 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 DOK7Q18PE1 504 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 SLC4A8Q2Y0W8 1093 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 CERS5Q8N5B7 392 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 CCDC148Q8NFR7 591 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 SNED1Q8TER0 1413 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 CCDC34Q96HJ3 373 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 DNAJC25Q9H1X3 360 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 CABP5Q9NP86 173 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 STX8Q9UNK0 236 aa22.13■■□□□ 1.13
CHMP6-201ENST00000325167 USP17L3A6NCW0 530 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 USP17L4A6NCW7 530 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 NLRP5P59047 1200 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 SHC4Q6S5L8 630 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 USP17L1Q7RTZ2 530 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 TMEM47Q9BQJ4 181 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 SRPRBQ9Y5M8 271 aaKnown RBP22.12■■□□□ 1.13
CHMP6-201ENST00000325167 MYH1P12882 1939 aa22.12■■□□□ 1.13
CHMP6-201ENST00000325167 C10orf71Q711Q0 1435 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 GRIN3BO60391 1043 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 HLA-DOAP06340 250 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 SLC44A5Q8NCS7 719 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 OXER1Q8TDS5 423 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 RTN4Q9NQC3 1192 aaKnown RBP22.11■■□□□ 1.13
CHMP6-201ENST00000325167 USP40Q9NVE5 1235 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 ZKSCAN5Q9Y2L8 839 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 PALM3A6NDB9 673 aaPredicted RBP22.11■■□□□ 1.13
CHMP6-201ENST00000325167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.11■■□□□ 1.13
CHMP6-201ENST00000325167 LUZP1Q86V48 1076 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 FERMT2Q96AC1 680 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 ZDHHC15Q96MV8 337 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 BPIFA3Q9BQP9 254 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 SPZ1Q9BXG8 430 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 MAD2L2Q9UI95 211 aa22.11■■□□□ 1.13
CHMP6-201ENST00000325167 FBXO2Q9UK22 296 aaPredicted RBP22.11■■□□□ 1.13
CHMP6-201ENST00000325167 GABPAQ06546 454 aa22.1■■□□□ 1.13
CHMP6-201ENST00000325167 CCDC12Q8WUD4 166 aaPredicted RBP22.1■■□□□ 1.13
CHMP6-201ENST00000325167 TNFRSF25Q93038 417 aa22.1■■□□□ 1.13
CHMP6-201ENST00000325167 KCNH3Q9ULD8 1083 aa22.1■■□□□ 1.13
CHMP6-201ENST00000325167 KIF13BQ9NQT8 1826 aa22.1■■□□□ 1.13
CHMP6-201ENST00000325167 BECN2A8MW95 431 aa22.09■■□□□ 1.13
CHMP6-201ENST00000325167 NPM3O75607 178 aaKnown RBP22.09■■□□□ 1.13
CHMP6-201ENST00000325167 PLCB2Q00722 1185 aa22.09■■□□□ 1.13
CHMP6-201ENST00000325167 KANK3Q6NY19 840 aa22.09■■□□□ 1.13
CHMP6-201ENST00000325167 PCDHB6Q9Y5E3 794 aa22.09■■□□□ 1.13
CHMP6-201ENST00000325167 F8W031 263 aaPredicted RBP22.08■■□□□ 1.13
CHMP6-201ENST00000325167 PARP1P09874 1014 aaKnown RBP22.08■■□□□ 1.13
CHMP6-201ENST00000325167 IQCB1Q15051 598 aa22.08■■□□□ 1.13
CHMP6-201ENST00000325167 OLFM4Q6UX06 510 aa22.08■■□□□ 1.13
CHMP6-201ENST00000325167 OSBPL5Q9H0X9 879 aaPredicted RBP22.08■■□□□ 1.13
CHMP6-201ENST00000325167 EHD4Q9H223 541 aa22.08■■□□□ 1.13
CHMP6-201ENST00000325167 SERPINB13Q9UIV8 391 aa22.08■■□□□ 1.13
CHMP6-201ENST00000325167 CRKP46108 304 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 NLRP12P59046 1061 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 PICALMQ13492 652 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 SARM1Q6SZW1 724 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 DAGLBQ8NCG7 672 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 SHISA4Q96DD7 197 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 PYM1Q9BRP8 204 aaKnown RBP22.07■■□□□ 1.12
CHMP6-201ENST00000325167 DHX36Q9H2U1 1008 aaKnown RBP22.07■■□□□ 1.12
CHMP6-201ENST00000325167 ECE2O60344 883 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 TPM4P67936 248 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 NPY5RQ15761 445 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 APOBEC3HQ6NTF7 200 aaKnown RBP22.07■■□□□ 1.12
CHMP6-201ENST00000325167 CDC42EP5Q6NZY7 148 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 KRBA2Q6ZNG9 492 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 BLIDQ8IZY5 108 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 CNNM3Q8NE01 707 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 TUBE1Q9UJT0 475 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 PCDHA4Q9UN74 947 aa22.07■■□□□ 1.12
CHMP6-201ENST00000325167 hCG_1642624A0A1W2PR95 340 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 hCG_1984214I3L0E3 225 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 KIAA2012Q0VF49 1180 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 TTC38Q5R3I4 469 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 DACT2Q5SW24 774 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 ZNF713Q8N859 430 aaPredicted RBP22.06■■□□□ 1.12
CHMP6-201ENST00000325167 C7orf43Q8WVR3 580 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 CEP95Q96GE4 821 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 CCDC17Q96LX7 622 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 CLIC6Q96NY7 704 aa22.06■■□□□ 1.12
CHMP6-201ENST00000325167 DBNDD1Q9H9R9 158 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms