RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 USP17L4A6NCW7 530 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 RIOK3O14730 519 aaKnown RBP20.95■□□□□ 0.94
SHISA3-201ENST00000319234 PPP6R2O75170 966 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 CMA1P23946 247 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 PTPAQ15257 358 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 ZRSR1Q15695 479 aaKnown RBP20.95■□□□□ 0.94
SHISA3-201ENST00000319234 HHIPL2Q6UWX4 724 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 USP17L1Q7RTZ2 530 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 CNTNAP5Q8WYK1 1306 aa20.95■□□□□ 0.94
SHISA3-201ENST00000319234 CTIFO43310 598 aaKnown RBP20.94■□□□□ 0.94
SHISA3-201ENST00000319234 JMYQ8N9B5 988 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 PNMA1Q8ND90 353 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 C7orf43Q8WVR3 580 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 DBNDD1Q9H9R9 158 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 SLX4Q8IY92 1834 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 BAG6P46379 1132 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 FKBP1AP62942 108 aaKnown RBP20.94■□□□□ 0.94
SHISA3-201ENST00000319234 SF3B2Q13435 895 aaKnown RBP20.94■□□□□ 0.94
SHISA3-201ENST00000319234 DHX8Q14562 1220 aaKnown RBP20.94■□□□□ 0.94
SHISA3-201ENST00000319234 AXDND1Q5T1B0 1012 aaPredicted RBP20.94■□□□□ 0.94
SHISA3-201ENST00000319234 ZNF710Q8N1W2 664 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 TIGD1Q96MW7 591 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 PAXBP1Q9Y5B6 917 aa20.94■□□□□ 0.94
SHISA3-201ENST00000319234 SMTNL1A8MU46 457 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 GSDMDP57764 484 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 CC2D2BQ6DHV5 1058 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 AOPEPQ8N6M6 819 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 NEDD1Q8NHV4 660 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 PHF20Q9BVI0 1012 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 VPS54Q9P1Q0 977 aa20.93■□□□□ 0.94
SHISA3-201ENST00000319234 ZNF219Q9P2Y4 722 aaPredicted RBP20.93■□□□□ 0.94
SHISA3-201ENST00000319234 SYCP1Q15431 976 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 RILPL1Q5EBL4 403 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 STRIP1Q5VSL9 837 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 TEKT1Q969V4 418 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 SHISA4Q96DD7 197 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.92■□□□□ 0.94
SHISA3-201ENST00000319234 USP40Q9NVE5 1235 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 IMPACTQ9P2X3 320 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 hCG_1642624A0A1W2PR95 340 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 WDHD1O75717 1129 aaPredicted RBP20.92■□□□□ 0.94
SHISA3-201ENST00000319234 MARCKSP29966 332 aaPredicted RBP20.92■□□□□ 0.94
SHISA3-201ENST00000319234 SCNN1DP51172 638 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 GRM4Q14833 912 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 CCDC94Q9BW85 323 aaPredicted RBP20.92■□□□□ 0.94
SHISA3-201ENST00000319234 MRIQ9BWK5 157 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 KCND1Q9NSA2 647 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 SNED1Q8TER0 1413 aa20.92■□□□□ 0.94
SHISA3-201ENST00000319234 ECE2O60344 883 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 ZNF202O95125 648 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 TNNT1P13805 278 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 GNAQP50148 359 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 NLRP12P59046 1061 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 TPM4P67936 248 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 NR5A1Q13285 461 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 PICALMQ13492 652 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 OXER1Q8TDS5 423 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 TMEM47Q9BQJ4 181 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 KCNQ5Q9NR82 932 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 FOCADQ5VW36 1801 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 MYH1P12882 1939 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 MYH6P13533 1939 aa20.91■□□□□ 0.94
SHISA3-201ENST00000319234 KRT2P35908 639 aa20.9■□□□□ 0.94
SHISA3-201ENST00000319234 TOB1P50616 345 aaPredicted RBP20.9■□□□□ 0.94
SHISA3-201ENST00000319234 OSBPL5Q9H0X9 879 aaPredicted RBP20.9■□□□□ 0.94
SHISA3-201ENST00000319234 FAM237AA0A1B0GTK4 181 aa20.9■□□□□ 0.94
SHISA3-201ENST00000319234 TPD52L1Q16890 204 aaPredicted RBP20.9■□□□□ 0.94
SHISA3-201ENST00000319234 APOBEC3HQ6NTF7 200 aaKnown RBP20.9■□□□□ 0.94
SHISA3-201ENST00000319234 CDC42EP5Q6NZY7 148 aa20.9■□□□□ 0.94
SHISA3-201ENST00000319234 SUPT20HQ8NEM7 779 aa20.9■□□□□ 0.94
SHISA3-201ENST00000319234 C16orf45Q96MC5 204 aaPredicted RBP20.9■□□□□ 0.94
SHISA3-201ENST00000319234 STX8Q9UNK0 236 aa20.9■□□□□ 0.94
SHISA3-201ENST00000319234 SCG2P13521 617 aa20.89■□□□□ 0.93
SHISA3-201ENST00000319234 PFKFB1P16118 471 aa20.89■□□□□ 0.93
SHISA3-201ENST00000319234 CRKP46108 304 aa20.89■□□□□ 0.93
SHISA3-201ENST00000319234 GABPAQ06546 454 aa20.89■□□□□ 0.93
SHISA3-201ENST00000319234 PFKFB3Q16875 520 aaPredicted RBP20.89■□□□□ 0.93
SHISA3-201ENST00000319234 DACT2Q5SW24 774 aa20.89■□□□□ 0.93
SHISA3-201ENST00000319234 BRMS1Q9HCU9 246 aa20.89■□□□□ 0.93
SHISA3-201ENST00000319234 DDX4Q9NQI0 724 aaKnown RBP20.89■□□□□ 0.93
SHISA3-201ENST00000319234 CUTAO60888 179 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 DEFB132Q7Z7B7 95 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 ANKRD7Q92527 254 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 ZDHHC15Q96MV8 337 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 PDGFDQ9GZP0 370 aaPredicted RBP20.88■□□□□ 0.93
SHISA3-201ENST00000319234 MAD2L2Q9UI95 211 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 HDLBPQ00341 1268 aaKnown RBP20.88■□□□□ 0.93
SHISA3-201ENST00000319234 DPCR1Q3MIW9 517 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 TSC1Q92574 1164 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 CABP5Q9NP86 173 aa20.88■□□□□ 0.93
SHISA3-201ENST00000319234 SKILP12757 684 aa20.87■□□□□ 0.93
SHISA3-201ENST00000319234 NOVP48745 357 aa20.87■□□□□ 0.93
SHISA3-201ENST00000319234 STAG2Q8N3U4 1231 aa20.87■□□□□ 0.93
SHISA3-201ENST00000319234 LZTS2Q9BRK4 669 aa20.87■□□□□ 0.93
SHISA3-201ENST00000319234 HPSEQ9Y251 543 aa20.87■□□□□ 0.93
SHISA3-201ENST00000319234 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
SHISA3-201ENST00000319234 PALM3A6NDB9 673 aaPredicted RBP20.86■□□□□ 0.93
SHISA3-201ENST00000319234 IKBKBO14920 756 aa20.86■□□□□ 0.93
SHISA3-201ENST00000319234 CCZ1BP86790 482 aa20.86■□□□□ 0.93
SHISA3-201ENST00000319234 CCZ1P86791 482 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms