RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PNKPQ96T60 521 aa21.64■■□□□ 1.06
RTN4-201ENST00000317610 ADAM21Q9UKJ8 722 aa21.64■■□□□ 1.06
RTN4-201ENST00000317610 ZBTB22O15209 634 aa21.64■■□□□ 1.05
RTN4-201ENST00000317610 TRHP20396 242 aaPredicted RBP21.64■■□□□ 1.05
RTN4-201ENST00000317610 KIF4BQ2VIQ3 1234 aa21.64■■□□□ 1.05
RTN4-201ENST00000317610 SMYD4Q8IYR2 804 aaPredicted RBP21.64■■□□□ 1.05
RTN4-201ENST00000317610 SLC35F6Q8N357 371 aa21.64■■□□□ 1.05
RTN4-201ENST00000317610 ESR2Q92731 530 aa21.64■■□□□ 1.05
RTN4-201ENST00000317610 CAPN2P17655 700 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 WHAMMP3Q1A5X7 153 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 BRINP3Q76B58 766 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 SLC4A9Q96Q91 983 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 L1RE1Q9UN81 338 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 XDHP47989 1333 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 WNT7AO00755 349 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 ERLIN1O75477 346 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 ERVK-24P63145 666 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 KRT31Q15323 416 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 E2F4Q16254 413 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 NAPGQ99747 312 aaPredicted RBP21.63■■□□□ 1.05
RTN4-201ENST00000317610 DUOX1Q9NRD9 1551 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 ZBTB1Q9Y2K1 713 aa21.63■■□□□ 1.05
RTN4-201ENST00000317610 SNAP23O00161 211 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 ARHGAP25P42331 645 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 ATP2C1P98194 919 aaPredicted RBP21.62■■□□□ 1.05
RTN4-201ENST00000317610 RAD51AP2Q09MP3 1159 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 TRIM14Q14142 442 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 ABHD10Q9NUJ1 306 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 RWDD2AQ9UIY3 292 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 CTNND2Q9UQB3 1225 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 MYH13Q9UKX3 1938 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 SPAG1Q07617 926 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 NPY5RQ15761 445 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 ACRBPQ8NEB7 543 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 TSPYL1Q9H0U9 437 aa21.62■■□□□ 1.05
RTN4-201ENST00000317610 RBM28Q9NW13 759 aaKnown RBP21.62■■□□□ 1.05
RTN4-201ENST00000317610 TUBBP07437 444 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 CYP26C1Q6V0L0 522 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 ENAHQ8N8S7 591 aaPredicted RBP21.61■■□□□ 1.05
RTN4-201ENST00000317610 MIGA1Q8NAN2 632 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 BCAMP50895 628 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 PIP4K2BP78356 416 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 ZSCAN26Q16670 478 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 TTC38Q5R3I4 469 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 IQUBQ8NA54 791 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
RTN4-201ENST00000317610 PYM1Q9BRP8 204 aaKnown RBP21.61■■□□□ 1.05
RTN4-201ENST00000317610 PODXL2Q9NZ53 605 aa21.61■■□□□ 1.05
RTN4-201ENST00000317610 SOS2Q07890 1332 aaPredicted RBP21.6■■□□□ 1.05
RTN4-201ENST00000317610 COPB1P53618 953 aaKnown RBP21.6■■□□□ 1.05
RTN4-201ENST00000317610 PDXDC2PQ6P474 469 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 GOLGA5Q8TBA6 731 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 ZSCAN10Q96SZ4 725 aaPredicted RBP21.6■■□□□ 1.05
RTN4-201ENST00000317610 PDE11AQ9HCR9 933 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 BRMS1Q9HCU9 246 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 ABCB6Q9NP58 842 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 XIRP1Q702N8 1843 aaKnown RBP21.6■■□□□ 1.05
RTN4-201ENST00000317610 BCL9O00512 1426 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 PRDM1O75626 825 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 GYS2P54840 703 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 AMPD2Q01433 879 aa21.6■■□□□ 1.05
RTN4-201ENST00000317610 DZIP3Q86Y13 1208 aaKnown RBP21.6■■□□□ 1.05
RTN4-201ENST00000317610 V9GY48 417 aaPredicted RBP21.6■■□□□ 1.05
RTN4-201ENST00000317610 CTAGE15A4D2H0 777 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 N4BP3O15049 544 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 GTPBP6O43824 516 aaPredicted RBP21.59■■□□□ 1.05
RTN4-201ENST00000317610 EIF3JO75822 258 aaKnown RBP21.59■■□□□ 1.05
RTN4-201ENST00000317610 CTAGE8P0CG41 777 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 IL6STP40189 918 aaPredicted RBP21.59■■□□□ 1.05
RTN4-201ENST00000317610 CCT6AP40227 531 aaKnown RBP21.59■■□□□ 1.05
RTN4-201ENST00000317610 ZNF174Q15697 407 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 CTAGE6Q86UF2 777 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 CTAGE4Q8IX94 777 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 GBP3Q9H0R5 595 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 LRP2BPQ9P2M1 347 aa21.59■■□□□ 1.05
RTN4-201ENST00000317610 RNF225M0QZC1 329 aaPredicted RBP21.58■■□□□ 1.05
RTN4-201ENST00000317610 PLEKHA8P1O95397 391 aa21.58■■□□□ 1.05
RTN4-201ENST00000317610 ABL1P00519 1130 aa21.58■■□□□ 1.05
RTN4-201ENST00000317610 CATIPQ7Z7H3 387 aa21.58■■□□□ 1.05
RTN4-201ENST00000317610 ADGRA1Q86SQ6 560 aa21.58■■□□□ 1.05
RTN4-201ENST00000317610 MINDY4BA8MYZ0 360 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 CALM1P0DP23 149 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 CALM2P0DP24 149 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 CALM3P0DP25 149 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 CYP7A1P22680 504 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 TROAPQ12815 778 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 PTGDRQ13258 359 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 TCP11X2Q5H9J9 407 aa21.58■■□□□ 1.04
RTN4-201ENST00000317610 FGRP09769 529 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 EVA1CP58658 441 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 VSNL1P62760 191 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 PAK1Q13153 545 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 MCM6Q14566 821 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 NOM1Q5C9Z4 860 aaKnown RBP21.57■■□□□ 1.04
RTN4-201ENST00000317610 RRAGBQ5VZM2 374 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 SDR42E1Q8WUS8 393 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 MTRQ99707 1265 aa21.57■■□□□ 1.04
RTN4-201ENST00000317610 CICQ96RK0 1608 aaPredicted RBP21.57■■□□□ 1.04
RTN4-201ENST00000317610 DDAH1O94760 285 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms