RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
TUBB3-201ENST00000315491 LLPHQ9BRT6 129 aaKnown RBP18.81■□□□□ 0.6
TUBB3-201ENST00000315491 FAM217BQ9NTX9 383 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-201ENST00000315491 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-201ENST00000315491 CCDC196A0A1B0GTZ2 297 aa18.8■□□□□ 0.6
TUBB3-201ENST00000315491 CPLX1O14810 134 aa18.8■□□□□ 0.6
TUBB3-201ENST00000315491 ADD1P35611 737 aaKnown RBP18.8■□□□□ 0.6
TUBB3-201ENST00000315491 ZKSCAN4Q969J2 545 aaPredicted RBP18.8■□□□□ 0.6
TUBB3-201ENST00000315491 ARHGEF10LQ9HCE6 1279 aa18.8■□□□□ 0.6
TUBB3-201ENST00000315491 RBM28Q9NW13 759 aaKnown RBP18.8■□□□□ 0.6
TUBB3-201ENST00000315491 SMC3Q9UQE7 1217 aa18.8■□□□□ 0.6
TUBB3-201ENST00000315491 TRAF5O00463 557 aa18.79■□□□□ 0.6
TUBB3-201ENST00000315491 CTDNEP1O95476 244 aa18.79■□□□□ 0.6
TUBB3-201ENST00000315491 IREB2P48200 963 aaKnown RBP18.79■□□□□ 0.6
TUBB3-201ENST00000315491 MAP3K9P80192 1104 aa18.79■□□□□ 0.6
TUBB3-201ENST00000315491 GRM4Q14833 912 aa18.79■□□□□ 0.6
TUBB3-201ENST00000315491 NOL9Q5SY16 702 aaKnown RBP18.79■□□□□ 0.6
TUBB3-201ENST00000315491 CPLX2Q6PUV4 134 aaKnown RBP18.79■□□□□ 0.6
TUBB3-201ENST00000315491 NSUN7Q8NE18 718 aaKnown RBP18.79■□□□□ 0.6
TUBB3-201ENST00000315491 MTMR7Q9Y216 660 aa18.79■□□□□ 0.6
TUBB3-201ENST00000315491 KIF5BP33176 963 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-201ENST00000315491 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-201ENST00000315491 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
TUBB3-201ENST00000315491 PICK1Q9NRD5 415 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 SYNPO2Q9UMS6 1093 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 A0A1W2PRG0 241 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 USP17L5A8MUK1 530 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 JAK2O60674 1132 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 DTNBO60941 627 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 CDKL5O76039 1030 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 TTLL12Q14166 644 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-201ENST00000315491 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 ACER1Q8TDN7 264 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 TMX2Q9Y320 296 aa18.78■□□□□ 0.6
TUBB3-201ENST00000315491 PTPDC1A2A3K4 754 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 PDHBP11177 359 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 ECE1P42892 770 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 NTRK3Q16288 839 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 MAP3K11Q16584 847 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 ATAD5Q96QE3 1844 aa18.77■□□□□ 0.6
TUBB3-201ENST00000315491 DOCK1Q14185 1865 aa18.77■□□□□ 0.59
TUBB3-201ENST00000315491 PARP1P09874 1014 aaKnown RBP18.76■□□□□ 0.59
TUBB3-201ENST00000315491 SNHG28P0DPA3 235 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 GJB2P29033 226 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 FMR1Q06787 632 aaKnown RBP eCLIP18.76■□□□□ 0.59
TUBB3-201ENST00000315491 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-201ENST00000315491 TMTC3Q6ZXV5 915 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 RASGRP2Q7LDG7 609 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 ARMC9Q7Z3E5 817 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 GMCL1P1Q8NEA9 526 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 MAD2L2Q9UI95 211 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-201ENST00000315491 F5H6K3 240 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 PLEKHA8P1O95397 391 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 IFNAR1P17181 557 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 PTPRAP18433 802 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 GNAQP50148 359 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 HMGN5P82970 282 aaKnown RBP18.76■□□□□ 0.59
TUBB3-201ENST00000315491 KLRC3Q07444 240 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 VGLL4Q14135 290 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 SLFN13Q68D06 897 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 USP17L2Q6R6M4 530 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 MOB2Q70IA6 237 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 ZNF408Q9H9D4 720 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 AS3MTQ9HBK9 375 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 CSADQ9Y600 493 aa18.76■□□□□ 0.59
TUBB3-201ENST00000315491 MYH4Q9Y623 1939 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 RAD21O60216 631 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 STAG2Q8N3U4 1231 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 DCAF4Q8WV16 495 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 DDX11Q96FC9 970 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 SNCAIPQ9Y6H5 919 aa18.75■□□□□ 0.59
TUBB3-201ENST00000315491 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 NDUFB10O96000 172 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 GOLGA8HP0CJ92 632 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 DDIT3P35638 169 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 ASPRV1Q53RT3 343 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
TUBB3-201ENST00000315491 PHKBQ93100 1093 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 FEZ1Q99689 392 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 WDR18Q9BV38 432 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 GOPCQ9HD26 462 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 PAPPA2Q9BXP8 1791 aa18.74■□□□□ 0.59
TUBB3-201ENST00000315491 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
TUBB3-201ENST00000315491 ZNF543Q08ER8 600 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 NBPF11Q86T75 865 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 SRBD1Q8N5C6 995 aaKnown RBP18.73■□□□□ 0.59
TUBB3-201ENST00000315491 GMCL1Q96IK5 515 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 LZTS2Q9BRK4 669 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 VCPKMTQ9H867 229 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 KIF3CO14782 793 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 FMNL1O95466 1100 aaPredicted RBP18.73■□□□□ 0.59
TUBB3-201ENST00000315491 ITGBL1O95965 494 aaPredicted RBP18.73■□□□□ 0.59
TUBB3-201ENST00000315491 SLC1A4P43007 532 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms