RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZSCAN16Q9H4T2 348 aaPredicted RBP26.14■■□□□ 1.78
IRF3-201ENST00000309877 MAD2L2Q9UI95 211 aa26.14■■□□□ 1.78
IRF3-201ENST00000309877 PTMSP20962 102 aa26.13■■□□□ 1.77
IRF3-201ENST00000309877 SEPT2Q15019 361 aa26.13■■□□□ 1.77
IRF3-201ENST00000309877 ANGEL2Q5VTE6 544 aaKnown RBP26.13■■□□□ 1.77
IRF3-201ENST00000309877 APOBEC3FQ8IUX4 373 aaKnown RBP26.13■■□□□ 1.77
IRF3-201ENST00000309877 CHAMP1Q96JM3 812 aa26.13■■□□□ 1.77
IRF3-201ENST00000309877 AIFM3Q96NN9 605 aa26.13■■□□□ 1.77
IRF3-201ENST00000309877 DEFB129Q9H1M3 183 aa26.13■■□□□ 1.77
IRF3-201ENST00000309877 GH2P01242 217 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 PARP1P09874 1014 aaKnown RBP26.12■■□□□ 1.77
IRF3-201ENST00000309877 SHROOM1Q2M3G4 852 aaPredicted RBP26.12■■□□□ 1.77
IRF3-201ENST00000309877 OTUD7BQ6GQQ9 843 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 LZTS2Q9BRK4 669 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 NYAP2Q9P242 653 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 V9GY48 417 aaPredicted RBP26.12■■□□□ 1.77
IRF3-201ENST00000309877 GUCY1A2P33402 732 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 ICA1Q05084 483 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 RESTQ13127 1097 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 STAG2Q8N3U4 1231 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 TEPSINQ96N21 525 aa26.12■■□□□ 1.77
IRF3-201ENST00000309877 ADARB2Q9NS39 739 aaKnown RBP26.12■■□□□ 1.77
IRF3-201ENST00000309877 PALM3A6NDB9 673 aaPredicted RBP26.11■■□□□ 1.77
IRF3-201ENST00000309877 UBE2Q2LH0YL09 131 aa26.11■■□□□ 1.77
IRF3-201ENST00000309877 EEF2P13639 858 aaKnown RBP26.11■■□□□ 1.77
IRF3-201ENST00000309877 RRP1BQ14684 758 aaKnown RBP26.11■■□□□ 1.77
IRF3-201ENST00000309877 CNTNAP5Q8WYK1 1306 aa26.11■■□□□ 1.77
IRF3-201ENST00000309877 MAP3K10Q02779 954 aa26.1■■□□□ 1.77
IRF3-201ENST00000309877 USP17L2Q6R6M4 530 aa26.1■■□□□ 1.77
IRF3-201ENST00000309877 GJB4Q9NTQ9 266 aa26.1■■□□□ 1.77
IRF3-201ENST00000309877 GREB1LQ9C091 1923 aaPredicted RBP26.1■■□□□ 1.77
IRF3-201ENST00000309877 USP17L5A8MUK1 530 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 GOLGA8HP0CJ92 632 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 HIRAP54198 1017 aaPredicted RBP26.09■■□□□ 1.77
IRF3-201ENST00000309877 KRT40Q6A162 431 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 MKL1Q969V6 931 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 GGA3Q9NZ52 723 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 RBM27Q9P2N5 1060 aaKnown RBP26.09■■□□□ 1.77
IRF3-201ENST00000309877 KLRF2D3W0D1 207 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 PDHBP11177 359 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 XBP1P17861 261 aa26.09■■□□□ 1.77
IRF3-201ENST00000309877 NCLP19338 710 aaKnown RBP26.09■■□□□ 1.77
IRF3-201ENST00000309877 hCG_1642624A0A1W2PR95 340 aa26.08■■□□□ 1.77
IRF3-201ENST00000309877 SOCS7O14512 581 aa26.08■■□□□ 1.77
IRF3-201ENST00000309877 JAG1P78504 1218 aa26.08■■□□□ 1.77
IRF3-201ENST00000309877 DNM1Q05193 864 aaKnown RBP26.08■■□□□ 1.77
IRF3-201ENST00000309877 ANP32EQ9BTT0 268 aa26.08■■□□□ 1.77
IRF3-201ENST00000309877 ZC3H4Q9UPT8 1303 aaKnown RBP26.08■■□□□ 1.76
IRF3-201ENST00000309877 PKN1Q16512 942 aa26.07■■□□□ 1.76
IRF3-201ENST00000309877 ASPRV1Q53RT3 343 aa26.07■■□□□ 1.76
IRF3-201ENST00000309877 RASGRP2Q7LDG7 609 aa26.07■■□□□ 1.76
IRF3-201ENST00000309877 HOOK2Q96ED9 719 aa26.07■■□□□ 1.76
IRF3-201ENST00000309877 SNHG28P0DPA3 235 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 CAP2P40123 477 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 FAM173BQ6P4H8 233 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 PIBF1Q8WXW3 757 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 ZBTB21Q9ULJ3 1066 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 CNPY2Q9Y2B0 182 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 RAD21O60216 631 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 PRPF40AO75400 957 aaKnown RBP26.06■■□□□ 1.76
IRF3-201ENST00000309877 KRT85P78386 507 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 GNL2Q13823 731 aaKnown RBP26.06■■□□□ 1.76
IRF3-201ENST00000309877 SAFBQ15424 915 aaKnown RBP eCLIP26.06■■□□□ 1.76
IRF3-201ENST00000309877 SIAH1Q8IUQ4 282 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 PPP2R3BQ9Y5P8 575 aa26.06■■□□□ 1.76
IRF3-201ENST00000309877 NBPF12Q5TAG4 269 aaPredicted RBP26.05■■□□□ 1.76
IRF3-201ENST00000309877 DCAF15Q66K64 600 aa26.05■■□□□ 1.76
IRF3-201ENST00000309877 L3MBTL3Q96JM7 780 aaPredicted RBP26.05■■□□□ 1.76
IRF3-201ENST00000309877 SPZ1Q9BXG8 430 aa26.05■■□□□ 1.76
IRF3-201ENST00000309877 ARHGEF10LQ9HCE6 1279 aa26.05■■□□□ 1.76
IRF3-201ENST00000309877 FRMPD2Q68DX3 1309 aaPredicted RBP26.05■■□□□ 1.76
IRF3-201ENST00000309877 SCG2P13521 617 aa26.04■■□□□ 1.76
IRF3-201ENST00000309877 SMARCA1P28370 1054 aa26.04■■□□□ 1.76
IRF3-201ENST00000309877 CCDC96Q2M329 555 aa26.04■■□□□ 1.76
IRF3-201ENST00000309877 PITPNM2Q9BZ72 1349 aa26.04■■□□□ 1.76
IRF3-201ENST00000309877 KIF23Q02241 960 aaPredicted RBP26.03■■□□□ 1.76
IRF3-201ENST00000309877 ZNF543Q08ER8 600 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 PFKFB3Q16875 520 aaPredicted RBP26.03■■□□□ 1.76
IRF3-201ENST00000309877 CSPP1Q1MSJ5 1256 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 SLFN13Q68D06 897 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 BRAPQ7Z569 592 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 GDPD2Q9HCC8 539 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 GPCPD1Q9NPB8 672 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 LMBRD1Q9NUN5 540 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 KCNJ14Q9UNX9 436 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 GLTPD2A6NH11 291 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 PHF20L1A8MW92 1017 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 MMP1P03956 469 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 GPATCH4Q5T3I0 446 aaKnown RBP26.03■■□□□ 1.76
IRF3-201ENST00000309877 DCAF4Q8WV16 495 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 VPS54Q9P1Q0 977 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 ISY1Q9ULR0 285 aaKnown RBP26.03■■□□□ 1.76
IRF3-201ENST00000309877 SYNPO2Q9UMS6 1093 aa26.03■■□□□ 1.76
IRF3-201ENST00000309877 UTRNP46939 3433 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 SRCAPQ6ZRS2 3230 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 FIBPO43427 364 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 CYTH3O43739 400 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 ASNSP08243 561 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 USP48Q86UV5 1035 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 GMCL1P1Q8NEA9 526 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms