RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 LNPKQ9C0E8 428 aa23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 SUPT16HQ9Y5B9 1047 aaKnown RBP23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 GJA8P48165 433 aa23.74■■□□□ 1.39
PDZRN3-202ENST00000308537 MORN1Q5T089 497 aa23.74■■□□□ 1.39
PDZRN3-202ENST00000308537 VCPKMTQ9H867 229 aa23.74■■□□□ 1.39
PDZRN3-202ENST00000308537 IGKV6D-41A0A0C4DH26 115 aa23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 EEF2P13639 858 aaKnown RBP23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 UBXN2AP68543 259 aa23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 TRIM32Q13049 653 aa23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 LRRFIP1Q32MZ4 808 aaKnown RBP23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 CCDC129Q6ZRS4 1044 aa23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 GPR142Q7Z601 462 aa23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 TRIB2Q92519 343 aa23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 PAK6Q9NQU5 681 aaPredicted RBP23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 COL11A1P12107 1806 aaPredicted RBP23.73■■□□□ 1.39
PDZRN3-202ENST00000308537 MINDY4BA8MYZ0 360 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 MAPK4P31152 587 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 LPAR1Q92633 364 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 EVI5LQ96CN4 794 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 RNF208Q9H0X6 261 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 RWDD1Q9H446 243 aaPredicted RBP23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 KANSL2Q9H9L4 492 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 MYH4Q9Y623 1939 aa23.72■■□□□ 1.39
PDZRN3-202ENST00000308537 NUCB1Q02818 461 aa23.71■■□□□ 1.39
PDZRN3-202ENST00000308537 PRPF38BQ5VTL8 546 aaKnown RBP23.71■■□□□ 1.39
PDZRN3-202ENST00000308537 SPICE1Q8N0Z3 855 aa23.71■■□□□ 1.39
PDZRN3-202ENST00000308537 ARHGEF10LQ9HCE6 1279 aa23.71■■□□□ 1.39
PDZRN3-202ENST00000308537 XRCC5P13010 732 aaKnown RBP23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 TDO2P48775 406 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 COG2Q14746 738 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 MAP3K21Q5TCX8 1036 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 VPS53Q5VIR6 699 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 B4GALNT3Q6L9W6 998 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 CHD1LQ86WJ1 897 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 PLEKHM2Q8IWE5 1019 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 STK11IPQ8N1F8 1099 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 U2AF1L4Q8WU68 220 aaKnown RBP23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 OSBPL3Q9H4L5 887 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 BIN2Q9UBW5 565 aaPredicted RBP23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 TACC3Q9Y6A5 838 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 ZNF236Q9UL36 1845 aa23.7■■□□□ 1.38
PDZRN3-202ENST00000308537 PLIN4Q96Q06 1357 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 HMGCRP04035 888 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 CYP2B6P20813 491 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 DSG3P32926 999 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 PLEKHH3Q7Z736 793 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 SOCS4Q8WXH5 440 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 NUDT12Q9BQG2 462 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 ADAMTS5Q9UNA0 930 aa23.69■■□□□ 1.38
PDZRN3-202ENST00000308537 A0A0D9SFI3 127 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 WDR46O15213 610 aaKnown RBP23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 PRDM1O75626 825 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 SGPL1O95470 568 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 IGHA2P01877 340 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 FAM227BQ96M60 508 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 CRISPLD2Q9H0B8 497 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 SH2D4AQ9H788 454 aa23.68■■□□□ 1.38
PDZRN3-202ENST00000308537 APPP05067 770 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 CCL14Q16627 93 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 NKX2-3Q8TAU0 364 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 ATG4CQ96DT6 458 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 MOV10L1Q9BXT6 1211 aaKnown RBP23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 TANGO6Q9C0B7 1094 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 HOXC10Q9NYD6 342 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 NYAP2Q9P242 653 aa23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 ZBTB47Q9UFB7 747 aaPredicted RBP23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.67■■□□□ 1.38
PDZRN3-202ENST00000308537 PTPREP23469 700 aa23.66■■□□□ 1.38
PDZRN3-202ENST00000308537 PPARAQ07869 468 aa23.66■■□□□ 1.38
PDZRN3-202ENST00000308537 TICAM2Q86XR7 235 aa23.66■■□□□ 1.38
PDZRN3-202ENST00000308537 MKNK2Q9HBH9 465 aa23.66■■□□□ 1.38
PDZRN3-202ENST00000308537 HELLSQ9NRZ9 838 aa23.66■■□□□ 1.38
PDZRN3-202ENST00000308537 FBXO28Q9NVF7 368 aa23.66■■□□□ 1.38
PDZRN3-202ENST00000308537 CCNA1P78396 465 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 GRB14Q14449 540 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 ZNF589Q86UQ0 364 aaPredicted RBP23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 DEFB118Q96PH6 123 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 NACAP1Q9BZK3 213 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 SPATC1LQ9H0A9 340 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 NAPBQ9H115 298 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 ALPK3Q96L96 1907 aa23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 ZNFX1Q9P2E3 1918 aaKnown RBP23.65■■□□□ 1.38
PDZRN3-202ENST00000308537 FLOT1O75955 427 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 HOXC6P09630 235 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 ATP2B2Q01814 1243 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 MAP2K5Q13163 448 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 REPS2Q8NFH8 660 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 MKL1Q969V6 931 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 CEP95Q96GE4 821 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 APBA2Q99767 749 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 MTMR4Q9NYA4 1195 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 FLRT1Q9NZU1 646 aa23.64■■□□□ 1.37
PDZRN3-202ENST00000308537 RPTORQ8N122 1335 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 SLC15A5A6NIM6 579 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 RGS2P41220 211 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 MNX1P50219 401 aaPredicted RBP23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 NMIQ13287 307 aaPredicted RBP23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 ALX1Q15699 326 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 MB21D1Q8N884 522 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms