RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
CSDC2-201ENST00000306149 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 GOLGA6L9A6NEM1 432 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
CSDC2-201ENST00000306149 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
CSDC2-201ENST00000306149 MCM7P33993 719 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 DPYDQ12882 1025 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 FHOD1Q9Y613 1164 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 MYH13Q9UKX3 1938 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 SYNRGQ9UMZ2 1314 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 A0A1B0GTH6 734 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 TADA3O75528 432 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 ERCC5P28715 1186 aaPredicted RBP17.19■□□□□ 0.34
CSDC2-201ENST00000306149 RBL2Q08999 1139 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 CUL4BQ13620 913 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 PPP2R5BQ15173 497 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 TNFRSF25Q93038 417 aa17.19■□□□□ 0.34
CSDC2-201ENST00000306149 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
CSDC2-201ENST00000306149 CASQ1P31415 396 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 NLRP5P59047 1200 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 SPATA1Q5VX52 437 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 LINC00116Q8NCU8 138 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
CSDC2-201ENST00000306149 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
CSDC2-201ENST00000306149 LZTFL1Q9NQ48 299 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 CNTNAP5Q8WYK1 1306 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 TBC1D9BQ66K14 1250 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 IGSF22Q8N9C0 903 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 BRMS1Q9HCU9 246 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
CSDC2-201ENST00000306149 ARGLU1Q9NWB6 273 aaPredicted RBP17.18■□□□□ 0.34
CSDC2-201ENST00000306149 DUOX1Q9NRD9 1551 aa17.18■□□□□ 0.34
CSDC2-201ENST00000306149 EFCAB8A8MWE9 144 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 PPP1R3GB7ZBB8 358 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 CCT6AP40227 531 aaKnown RBP17.17■□□□□ 0.34
CSDC2-201ENST00000306149 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
CSDC2-201ENST00000306149 IL17AQ16552 155 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 TAF3Q5VWG9 929 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 MAPK8IP1Q9UQF2 711 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 AKR1B15C9JRZ8 316 aaPredicted RBP17.17■□□□□ 0.34
CSDC2-201ENST00000306149 TPM1P09493 284 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 XDHP47989 1333 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
CSDC2-201ENST00000306149 RAD9BQ6WBX8 426 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 MTRQ99707 1265 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
CSDC2-201ENST00000306149 LAMB2P55268 1798 aa17.17■□□□□ 0.34
CSDC2-201ENST00000306149 TSPY2A6NKD2 308 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 SEC31AO94979 1220 aaKnown RBP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 PNMA6AP0CW24 399 aaPredicted RBP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 FBXO33Q7Z6M2 555 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 FGRP09769 529 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 CALM1P0DP23 149 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 CALM2P0DP24 149 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 CALM3P0DP25 149 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 ATP2C1P98194 919 aaPredicted RBP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 PPFIBP1Q86W92 1011 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
CSDC2-201ENST00000306149 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 SRP68Q9UHB9 627 aaKnown RBP17.16■□□□□ 0.34
CSDC2-201ENST00000306149 DDAH1O94760 285 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 SCG2P13521 617 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 CASP14P31944 242 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 RPS8P62241 208 aaKnown RBP17.15■□□□□ 0.34
CSDC2-201ENST00000306149 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 HIBADHP31937 336 aaKnown RBP17.15■□□□□ 0.34
CSDC2-201ENST00000306149 TEX35Q5T0J7 233 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
CSDC2-201ENST00000306149 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
CSDC2-201ENST00000306149 MAP3K9P80192 1104 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 CDKAL1Q5VV42 579 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 TMCO3Q6UWJ1 677 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
CSDC2-201ENST00000306149 KIFC2Q96AC6 838 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
CSDC2-201ENST00000306149 VPS16Q9H269 839 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 FXR1P51114 621 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSDC2-201ENST00000306149 RCSD1Q6JBY9 416 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 DYNLL2Q96FJ2 89 aa17.14■□□□□ 0.33
CSDC2-201ENST00000306149 E2F4Q16254 413 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 RNF225M0QZC1 329 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms