RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
LONRF3-201ENST00000304778 GPR101Q96P66 508 aaPredicted RBP18.38■□□□□ 0.53
LONRF3-201ENST00000304778 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 USP17L21D6R901 530 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 PRDM1O75626 825 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 GTF2A1P52655 376 aaPredicted RBP18.37■□□□□ 0.53
LONRF3-201ENST00000304778 EVX2Q03828 476 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 GPS2Q13227 327 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 SLC27A3Q5K4L6 730 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 SECISBP2LQ93073 1101 aaKnown RBP18.37■□□□□ 0.53
LONRF3-201ENST00000304778 YY1AP1Q9H869 796 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 TNKSO95271 1327 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
LONRF3-201ENST00000304778 SEC23AQ15436 765 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 NUP133Q8WUM0 1156 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 UBXN4Q92575 508 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 FANCLQ9NW38 375 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 PHLPP2Q6ZVD8 1323 aa18.37■□□□□ 0.53
LONRF3-201ENST00000304778 CHRM1P11229 460 aaPredicted RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 OAS2P29728 719 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 ETF1P62495 437 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 SAFBQ15424 915 aaKnown RBP eCLIP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 HOOK1Q9UJC3 728 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 XDHP47989 1333 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 BTBD18B2RXH4 712 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 BMP6P22004 513 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 GUCY1A2P33402 732 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 MDM2Q00987 491 aaPredicted RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 DIS3L2Q8IYB7 885 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 DZIP1Q86YF9 867 aaKnown RBP18.36■□□□□ 0.53
LONRF3-201ENST00000304778 TRIM22Q8IYM9 498 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 FANCBQ8NB91 859 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 CCDC34Q96HJ3 373 aa18.36■□□□□ 0.53
LONRF3-201ENST00000304778 TMEM232C9JQI7 657 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 URI1O94763 535 aaPredicted RBP18.35■□□□□ 0.53
LONRF3-201ENST00000304778 GPSM2P81274 684 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 PDE4BQ07343 736 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
LONRF3-201ENST00000304778 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
LONRF3-201ENST00000304778 FBXO2Q9UK22 296 aaPredicted RBP18.35■□□□□ 0.53
LONRF3-201ENST00000304778 DUOX1Q9NRD9 1551 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 FOXN1O15353 648 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 SPTY2D1Q68D10 685 aaPredicted RBP18.35■□□□□ 0.53
LONRF3-201ENST00000304778 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 ENAHQ8N8S7 591 aaPredicted RBP18.35■□□□□ 0.53
LONRF3-201ENST00000304778 CARD6Q9BX69 1037 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 INTS13Q9NVM9 706 aa18.35■□□□□ 0.53
LONRF3-201ENST00000304778 FGRP09769 529 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 PTPREP23469 700 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 POSTNQ15063 836 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 SPECC1Q5M775 1068 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 GEMIN8Q9NWZ8 242 aaKnown RBP18.34■□□□□ 0.53
LONRF3-201ENST00000304778 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 CWC15Q9P013 229 aaKnown RBP18.34■□□□□ 0.53
LONRF3-201ENST00000304778 MAN1B1Q9UKM7 699 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 KCNJ14Q9UNX9 436 aa18.34■□□□□ 0.53
LONRF3-201ENST00000304778 SASH3O75995 380 aa18.33■□□□□ 0.53
LONRF3-201ENST00000304778 CYP2D6P10635 497 aa18.33■□□□□ 0.53
LONRF3-201ENST00000304778 DDR1Q08345 913 aa18.33■□□□□ 0.53
LONRF3-201ENST00000304778 NT5DC1Q5TFE4 455 aa18.33■□□□□ 0.53
LONRF3-201ENST00000304778 PROM2Q8N271 834 aa18.33■□□□□ 0.53
LONRF3-201ENST00000304778 CRACR2BQ8N4Y2 399 aaPredicted RBP18.33■□□□□ 0.53
LONRF3-201ENST00000304778 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.53
LONRF3-201ENST00000304778 BRWD3Q6RI45 1802 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 DEXIO95424 95 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 ICE2Q659A1 982 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 TRIM65Q6PJ69 517 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 TMEM139Q8IV31 216 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 UBXN6Q9BZV1 441 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 CCDC196A0A1B0GTZ2 297 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
LONRF3-201ENST00000304778 RCAN1P53805 252 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 GRIN1Q05586 938 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 GRIK5Q16478 980 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 ZNF804AQ7Z570 1209 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 SRLQ86TD4 932 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 REXO1L1PQ8IX06 675 aa18.33■□□□□ 0.52
LONRF3-201ENST00000304778 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.52
LONRF3-201ENST00000304778 MYH6P13533 1939 aa18.32■□□□□ 0.52
LONRF3-201ENST00000304778 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
LONRF3-201ENST00000304778 ARHGAP6O43182 974 aa18.32■□□□□ 0.52
LONRF3-201ENST00000304778 PCP11498 1178 aaKnown RBP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 RRP15Q9Y3B9 282 aaKnown RBP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 MYH2Q9UKX2 1941 aa18.32■□□□□ 0.52
LONRF3-201ENST00000304778 POLR2DO15514 142 aaKnown RBP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
LONRF3-201ENST00000304778 IFIT1BQ5T764 474 aaKnown RBP18.32■□□□□ 0.52
LONRF3-201ENST00000304778 ZNF579Q8NAF0 562 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms