RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 PPP1R13BQ96KQ4 1090 aa17.85■□□□□ 0.45
ARHGEF28-201ENST00000296794 IFIH1Q9BYX4 1025 aaKnown RBP17.85■□□□□ 0.45
ARHGEF28-201ENST00000296794 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF28-201ENST00000296794 FAM207AQ9NSI2 230 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF28-201ENST00000296794 ATP2B4P23634 1241 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 MAPKAPK5Q8IW41 473 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 MYO5CQ9NQX4 1742 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 A6NNZ2 444 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 ZBTB16Q05516 673 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 ZSCAN26Q16670 478 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 TUBB8Q3ZCM7 444 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 TNFAIP3P21580 790 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 KLHL7Q8IXQ5 586 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 FANCBQ8NB91 859 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 PPFIA1Q13136 1202 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 PAK2Q13177 524 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 MORC3Q14149 939 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 DPCR1Q3MIW9 517 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 HERC4Q5GLZ8 1057 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 FAM47AQ5JRC9 791 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 ZBTB38Q8NAP3 1195 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 LRRC45Q96CN5 670 aa17.84■□□□□ 0.45
ARHGEF28-201ENST00000296794 A0A087WWV3 80 aa17.83■□□□□ 0.45
ARHGEF28-201ENST00000296794 CEP104O60308 925 aa17.83■□□□□ 0.45
ARHGEF28-201ENST00000296794 ZBED4O75132 1171 aa17.83■□□□□ 0.45
ARHGEF28-201ENST00000296794 MXRA7P84157 204 aa17.83■□□□□ 0.45
ARHGEF28-201ENST00000296794 CFAP221Q4G0U5 840 aa17.83■□□□□ 0.45
ARHGEF28-201ENST00000296794 HAUS3Q68CZ6 603 aa17.83■□□□□ 0.45
ARHGEF28-201ENST00000296794 VIMP08670 466 aaKnown RBP17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 FAM212AQ96EL1 285 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 RPGRIP1Q96KN7 1286 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 FTOQ9C0B1 505 aaKnown RBP eCLIP17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 ABCA8O94911 1581 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 USPL1Q5W0Q7 1092 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 GBP6Q6ZN66 633 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 RRAGAQ7L523 313 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 APBB1IPQ7Z5R6 666 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 TRIM31Q9BZY9 425 aa17.83■□□□□ 0.44
ARHGEF28-201ENST00000296794 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 SPOPO43791 374 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 EAPPQ56P03 285 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 CPXCR1Q8N123 301 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 UTP11Q9Y3A2 253 aaKnown RBP17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 PCDHA5Q9Y5H7 936 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 TRIM37O94972 964 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 TFAP4Q01664 338 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 KLHL30Q0D2K2 578 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 SLC39A14Q15043 492 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 ADCY7P51828 1080 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 PKD2L1Q9P0L9 805 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 TBC1D7Q9P0N9 293 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 MKRN1Q9UHC7 482 aaKnown RBP17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 ACTN4O43707 911 aaKnown RBP17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 DKC1O60832 514 aaKnown RBP eCLIP17.82■□□□□ 0.442e-11■■■■■ 51.5
ARHGEF28-201ENST00000296794 IRX3P78415 501 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 CALCRLQ16602 461 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 USP40Q9NVE5 1235 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 CSADQ9Y600 493 aa17.82■□□□□ 0.44
ARHGEF28-201ENST00000296794 STX10O60499 249 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 SPATA1Q5VX52 437 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 KRT27Q7Z3Y8 459 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 PPM1EQ8WY54 764 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 CALUO43852 315 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 SFMBT2Q5VUG0 894 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 NSMFQ6X4W1 530 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 RCOR1Q9UKL0 485 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 IL6STP40189 918 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 ZSCAN10Q96SZ4 725 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 NLRC4Q9NPP4 1024 aa17.81■□□□□ 0.44
ARHGEF28-201ENST00000296794 SETDB1Q15047 1291 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 RUFY4Q6ZNE9 571 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 LZTS2Q9BRK4 669 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 TNKSO95271 1327 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 CHMP2AO43633 222 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 PPARDQ03181 441 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 NKIRAS1Q9NYS0 192 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 ASAP1Q9ULH1 1129 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 MAP3K15Q6ZN16 1313 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 USP17L12C9JPN9 530 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 USP17L21D6R901 530 aa17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 NOP56O00567 594 aaKnown RBP17.8■□□□□ 0.44
ARHGEF28-201ENST00000296794 RPS6KA1Q15418 735 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms