RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CERKLQ49MI3 558 aaPredicted RBP26.42■■□□□ 1.82
PTX3-201ENST00000295927 TATDN1Q6P1N9 297 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 CLEC10AQ8IUN9 316 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 FAM151AQ8WW52 585 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 SHISA4Q96DD7 197 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 CSRNP1Q96S65 589 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 FHDC1Q9C0D6 1143 aaPredicted RBP26.42■■□□□ 1.82
PTX3-201ENST00000295927 MYOZ2Q9NPC6 264 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 RCOR1Q9UKL0 485 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 CNTNAP1P78357 1384 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 TTLL1O95922 423 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 XBP1P17861 261 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 DEKP35659 375 aaKnown RBP26.41■■□□□ 1.82
PTX3-201ENST00000295927 SAFBQ15424 915 aaKnown RBP eCLIP26.41■■□□□ 1.82
PTX3-201ENST00000295927 RASGRP2Q7LDG7 609 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 VEZTQ9HBM0 779 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 VPS54Q9P1Q0 977 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 CLIP2Q9UDT6 1046 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 WNT10BO00744 389 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 FKBP1CQ5VVH2 108 aa26.41■■□□□ 1.82
PTX3-201ENST00000295927 MYO1BO43795 1136 aa26.4■■□□□ 1.82
PTX3-201ENST00000295927 MMP14P50281 582 aa26.4■■□□□ 1.82
PTX3-201ENST00000295927 ZNF280AP59817 542 aaPredicted RBP26.4■■□□□ 1.82
PTX3-201ENST00000295927 NBPF9Q3BBW0 867 aa26.4■■□□□ 1.82
PTX3-201ENST00000295927 ZSCAN23Q3MJ62 389 aa26.4■■□□□ 1.82
PTX3-201ENST00000295927 DIS3L2Q8IYB7 885 aaKnown RBP26.4■■□□□ 1.82
PTX3-201ENST00000295927 LRRC47Q8N1G4 583 aaKnown RBP26.4■■□□□ 1.82
PTX3-201ENST00000295927 RTEL1Q9NZ71 1219 aa26.4■■□□□ 1.82
PTX3-201ENST00000295927 BTBD18B2RXH4 712 aa26.39■■□□□ 1.82
PTX3-201ENST00000295927 PARP1P09874 1014 aaKnown RBP26.39■■□□□ 1.82
PTX3-201ENST00000295927 GOLGA8HP0CJ92 632 aa26.39■■□□□ 1.82
PTX3-201ENST00000295927 PIBF1Q8WXW3 757 aa26.39■■□□□ 1.82
PTX3-201ENST00000295927 LZTS2Q9BRK4 669 aa26.39■■□□□ 1.82
PTX3-201ENST00000295927 SCG2P13521 617 aa26.39■■□□□ 1.81
PTX3-201ENST00000295927 PFKFB3Q16875 520 aaPredicted RBP26.39■■□□□ 1.81
PTX3-201ENST00000295927 SLC35G1Q2M3R5 365 aa26.39■■□□□ 1.81
PTX3-201ENST00000295927 USP17L2Q6R6M4 530 aa26.39■■□□□ 1.81
PTX3-201ENST00000295927 PGBD1Q96JS3 809 aa26.39■■□□□ 1.81
PTX3-201ENST00000295927 GJA3Q9Y6H8 435 aa26.39■■□□□ 1.81
PTX3-201ENST00000295927 KLRF2D3W0D1 207 aa26.38■■□□□ 1.81
PTX3-201ENST00000295927 GMPSP49915 693 aaPredicted RBP26.38■■□□□ 1.81
PTX3-201ENST00000295927 SHROOM1Q2M3G4 852 aaPredicted RBP26.38■■□□□ 1.81
PTX3-201ENST00000295927 PHF20Q9BVI0 1012 aa26.38■■□□□ 1.81
PTX3-201ENST00000295927 FOXP1Q9H334 677 aaPredicted RBP26.38■■□□□ 1.81
PTX3-201ENST00000295927 CLIC4Q9Y696 253 aa26.38■■□□□ 1.81
PTX3-201ENST00000295927 GOLGA6L4A6NEF3 574 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 USP17L5A8MUK1 530 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 CYTH3O43739 400 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 ARHGAP27Q6ZUM4 889 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 NOSTRINQ8IVI9 506 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 DICER1Q9UPY3 1922 aaKnown RBP26.37■■□□□ 1.81
PTX3-201ENST00000295927 PDHBP11177 359 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 PPP4R3BQ5MIZ7 849 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 FAM83AQ86UY5 434 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 DPF2Q92785 391 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 SYAP1Q96A49 352 aaPredicted RBP26.37■■□□□ 1.81
PTX3-201ENST00000295927 POLR3EQ9NVU0 708 aa26.37■■□□□ 1.81
PTX3-201ENST00000295927 HERC5Q9UII4 1024 aaKnown RBP26.37■■□□□ 1.81
PTX3-201ENST00000295927 VEGFAP15692 232 aaPredicted RBP26.36■■□□□ 1.81
PTX3-201ENST00000295927 ZNF541Q9H0D2 1346 aa26.36■■□□□ 1.81
PTX3-201ENST00000295927 ATP2B2Q01814 1243 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 RBM26Q5T8P6 1007 aaKnown RBP26.35■■□□□ 1.81
PTX3-201ENST00000295927 MICALL2Q8IY33 904 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 OXER1Q8TDS5 423 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 SPZ1Q9BXG8 430 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.35■■□□□ 1.81
PTX3-201ENST00000295927 GDF11O95390 407 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 EGFRP00533 1210 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 SNHG28P0DPA3 235 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 NASPP49321 788 aaPredicted RBP26.35■■□□□ 1.81
PTX3-201ENST00000295927 NR5A1Q13285 461 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 ABCB5Q2M3G0 1257 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 ANO1Q5XXA6 986 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 TMEM179Q6ZVK1 233 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 LINC00301Q8NCQ3 95 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 TMEM39BQ9GZU3 492 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 KANSL2Q9H9L4 492 aa26.35■■□□□ 1.81
PTX3-201ENST00000295927 SBF1O95248 1867 aa26.34■■□□□ 1.81
PTX3-201ENST00000295927 YEATS4O95619 227 aa26.34■■□□□ 1.81
PTX3-201ENST00000295927 ZNF445P59923 1031 aa26.34■■□□□ 1.81
PTX3-201ENST00000295927 CPVLQ9H3G5 476 aa26.34■■□□□ 1.81
PTX3-201ENST00000295927 CNOT7Q9UIV1 285 aaKnown RBP26.34■■□□□ 1.81
PTX3-201ENST00000295927 KRT2P35908 639 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 RRP1BQ14684 758 aaKnown RBP26.33■■□□□ 1.81
PTX3-201ENST00000295927 SEPT2Q15019 361 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 STK38Q15208 465 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 NYAP2Q9P242 653 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 EEF2P13639 858 aaKnown RBP26.33■■□□□ 1.81
PTX3-201ENST00000295927 LMNB1P20700 586 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 SMARCA1P28370 1054 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 ASPRV1Q53RT3 343 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 CDAN1Q8IWY9 1227 aa26.33■■□□□ 1.81
PTX3-201ENST00000295927 FRMPD2Q68DX3 1309 aaPredicted RBP26.32■■□□□ 1.8
PTX3-201ENST00000295927 LIG1P18858 919 aa26.32■■□□□ 1.8
PTX3-201ENST00000295927 JAG1P78504 1218 aa26.32■■□□□ 1.8
PTX3-201ENST00000295927 NPY5RQ15761 445 aa26.32■■□□□ 1.8
PTX3-201ENST00000295927 MKL1Q969V6 931 aa26.32■■□□□ 1.8
PTX3-201ENST00000295927 FSD2A1L4K1 749 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 CCDC183Q5T5S1 534 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 SAMD7Q7Z3H4 446 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 322.8 ms