RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 KRT32Q14532 448 aa22.69■■□□□ 1.22
KRTCAP3-201ENST00000288873 ANKRD23Q86SG2 305 aa22.69■■□□□ 1.22
KRTCAP3-201ENST00000288873 MKL1Q969V6 931 aa22.69■■□□□ 1.22
KRTCAP3-201ENST00000288873 ZSCAN10Q96SZ4 725 aaPredicted RBP22.69■■□□□ 1.22
KRTCAP3-201ENST00000288873 CCDC178Q5BJE1 867 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 TREML2Q5T2D2 321 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 MB21D2Q8IYB1 491 aaPredicted RBP22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 LRRC47Q8N1G4 583 aaKnown RBP22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 C12orf42Q96LP6 360 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 UBAC1Q9BSL1 405 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 VCPKMTQ9H867 229 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 GOPCQ9HD26 462 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 AGTPBP1Q9UPW5 1226 aa22.68■■□□□ 1.22
KRTCAP3-201ENST00000288873 PDHXO00330 501 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 RAD21O60216 631 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 NOVP48745 357 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 ADCK5Q3MIX3 580 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 KIAA1755Q5JYT7 1200 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 RCSD1Q6JBY9 416 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 CHST3Q7LGC8 479 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 TTC14Q96N46 770 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 NEK1Q96PY6 1258 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 BEGAINQ9BUH8 593 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 RNF186Q9NXI6 227 aa22.67■■□□□ 1.22
KRTCAP3-201ENST00000288873 TNKSO95271 1327 aa22.66■■□□□ 1.22
KRTCAP3-201ENST00000288873 ALDH1A1P00352 501 aa22.66■■□□□ 1.22
KRTCAP3-201ENST00000288873 SPICE1Q8N0Z3 855 aa22.66■■□□□ 1.22
KRTCAP3-201ENST00000288873 SYNPO2Q9UMS6 1093 aa22.66■■□□□ 1.22
KRTCAP3-201ENST00000288873 F5H6K3 240 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 TRPA1O75762 1119 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 TOP1P11387 765 aaKnown RBP22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 VCAM1P19320 739 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 MCM5P33992 734 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 LBX1P52954 281 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 ANTXR2P58335 489 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 KLRC3Q07444 240 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 PABPC4Q13310 644 aaKnown RBP eCLIP22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 COL9A3Q14050 684 aaPredicted RBP22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 DGKHQ86XP1 1220 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 ENAHQ8N8S7 591 aaPredicted RBP22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 LPAR1Q92633 364 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 JAKMIP1Q96N16 626 aaKnown RBP22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 TMEM47Q9BQJ4 181 aa22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 ZCCHC17Q9NP64 241 aaKnown RBP22.65■■□□□ 1.22
KRTCAP3-201ENST00000288873 IFIT3O14879 490 aaKnown RBP22.64■■□□□ 1.21
KRTCAP3-201ENST00000288873 PRC1O43663 620 aa22.64■■□□□ 1.21
KRTCAP3-201ENST00000288873 HSPA8P11142 646 aaKnown RBP22.64■■□□□ 1.21
KRTCAP3-201ENST00000288873 TAF1CQ15572 869 aaPredicted RBP22.64■■□□□ 1.21
KRTCAP3-201ENST00000288873 SLC45A1Q9Y2W3 748 aa22.64■■□□□ 1.21
KRTCAP3-201ENST00000288873 ERICH2A1L162 156 aa22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 NDUFB10O96000 172 aa22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 SART3Q15020 963 aaKnown RBP22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 SEC23AQ15436 765 aa22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 GMCL1P1Q8NEA9 526 aa22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 ANKS1AQ92625 1134 aa22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 RPAP3Q9H6T3 665 aaPredicted RBP22.63■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L15C9J2P7 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L13C9JLJ4 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L11C9JVI0 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L18D6R9N7 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L22D6RA61 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L17D6RBQ6 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L19D6RCP7 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L20D6RJB6 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 HMGB1P09429 215 aaKnown RBP22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 OSBPP22059 807 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 HOXA7P31268 230 aaPredicted RBP22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 USP17L24Q0WX57 530 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 TMEM67Q5HYA8 995 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 IFIT1BQ5T764 474 aaKnown RBP22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 SLFN13Q68D06 897 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 CHMP4CQ96CF2 233 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 KAT14Q9H8E8 782 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 SAGE1Q9NXZ1 904 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 MTMR7Q9Y216 660 aa22.62■■□□□ 1.21
KRTCAP3-201ENST00000288873 WDR46O15213 610 aaKnown RBP22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 CA12O43570 354 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 TBC1D8O95759 1140 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 CYP2C8P10632 490 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 PSMA5P28066 241 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 CRHR2Q13324 411 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 WTAPQ15007 396 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 FAM83BQ5T0W9 1011 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 DHX32Q7L7V1 743 aaKnown RBP22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 IGDCC4Q8TDY8 1250 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 NUP88Q99567 741 aaPredicted RBP22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 TANGO6Q9C0B7 1094 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 ASCC2Q9H1I8 757 aaPredicted RBP22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 ZFYVE28Q9HCC9 887 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 PNMA3Q9UL41 463 aa22.61■■□□□ 1.21
KRTCAP3-201ENST00000288873 CPA1P15085 419 aa22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 IRX3P78415 501 aaPredicted RBP22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 EXOSC10Q01780 885 aaKnown RBP22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 BLOC1S2Q6QNY1 142 aa22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 CATSPERGQ6ZRH7 1159 aa22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 PNMA1Q8ND90 353 aa22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 TMEM87BQ96K49 555 aa22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 PARK7Q99497 189 aaKnown RBP22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 MTA3Q9BTC8 594 aa22.6■■□□□ 1.21
KRTCAP3-201ENST00000288873 LRRC2Q9BYS8 371 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms