RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RFC4P35249 363 aa28.6■■■□□ 2.17
ROM1-201ENST00000278833 VPS54Q9P1Q0 977 aa28.6■■■□□ 2.17
ROM1-201ENST00000278833 RPS8P62241 208 aaKnown RBP28.59■■■□□ 2.17
ROM1-201ENST00000278833 SLU7O95391 586 aaKnown RBP28.59■■■□□ 2.17
ROM1-201ENST00000278833 PLEKHA8P1O95397 391 aa28.59■■■□□ 2.17
ROM1-201ENST00000278833 SPECC1Q5M775 1068 aa28.59■■■□□ 2.17
ROM1-201ENST00000278833 TBC1D9BQ66K14 1250 aa28.59■■■□□ 2.17
ROM1-201ENST00000278833 ZNF592Q92610 1267 aa28.59■■■□□ 2.17
ROM1-201ENST00000278833 DCP1AQ9NPI6 582 aaPredicted RBP28.59■■■□□ 2.17
ROM1-201ENST00000278833 SLFN14P0C7P3 912 aa28.58■■■□□ 2.17
ROM1-201ENST00000278833 MECOMQ03112 1051 aa28.58■■■□□ 2.17
ROM1-201ENST00000278833 TMEM139Q8IV31 216 aa28.58■■■□□ 2.17
ROM1-201ENST00000278833 CCDC82Q8N4S0 544 aa28.58■■■□□ 2.17
ROM1-201ENST00000278833 PYM1Q9BRP8 204 aaKnown RBP28.58■■■□□ 2.17
ROM1-201ENST00000278833 ARHGAP6O43182 974 aa28.57■■■□□ 2.16
ROM1-201ENST00000278833 CCDC93Q567U6 631 aa28.57■■■□□ 2.16
ROM1-201ENST00000278833 NFE2L3Q9Y4A8 694 aa28.57■■■□□ 2.16
ROM1-201ENST00000278833 USP17L12C9JPN9 530 aa28.57■■■□□ 2.16
ROM1-201ENST00000278833 USP17L21D6R901 530 aa28.57■■■□□ 2.16
ROM1-201ENST00000278833 HIBADHP31937 336 aaKnown RBP28.57■■■□□ 2.16
ROM1-201ENST00000278833 ATP2C1P98194 919 aaPredicted RBP28.57■■■□□ 2.16
ROM1-201ENST00000278833 FMR1Q06787 632 aaKnown RBP eCLIP28.57■■■□□ 2.16
ROM1-201ENST00000278833 NLRP3Q96P20 1036 aa28.57■■■□□ 2.16
ROM1-201ENST00000278833 SRP68Q9UHB9 627 aaKnown RBP28.57■■■□□ 2.16
ROM1-201ENST00000278833 ROBO3Q96MS0 1386 aa28.56■■■□□ 2.16
ROM1-201ENST00000278833 SMIM22K7EJ46 135 aa28.56■■■□□ 2.16
ROM1-201ENST00000278833 ZBTB7AO95365 584 aa28.56■■■□□ 2.16
ROM1-201ENST00000278833 CTCFLQ8NI51 663 aaPredicted RBP28.56■■■□□ 2.16
ROM1-201ENST00000278833 ZNF215Q9UL58 517 aaPredicted RBP28.56■■■□□ 2.16
ROM1-201ENST00000278833 V9GY48 417 aaPredicted RBP28.56■■■□□ 2.16
ROM1-201ENST00000278833 CYP2D7A0A087X1C5 515 aa28.55■■■□□ 2.16
ROM1-201ENST00000278833 SLC16A10Q8TF71 515 aa28.55■■■□□ 2.16
ROM1-201ENST00000278833 GOLGA6L9A6NEM1 432 aa28.55■■■□□ 2.16
ROM1-201ENST00000278833 WTIPA6NIX2 430 aaPredicted RBP28.55■■■□□ 2.16
ROM1-201ENST00000278833 ETF1P62495 437 aaKnown RBP28.55■■■□□ 2.16
ROM1-201ENST00000278833 EARS2Q5JPH6 523 aaKnown RBP28.55■■■□□ 2.16
ROM1-201ENST00000278833 ANKS1AQ92625 1134 aa28.55■■■□□ 2.16
ROM1-201ENST00000278833 GSDMAQ96QA5 445 aa28.55■■■□□ 2.16
ROM1-201ENST00000278833 TNRC6CQ9HCJ0 1690 aaKnown RBP28.55■■■□□ 2.16
ROM1-201ENST00000278833 TMEM232C9JQI7 657 aa28.54■■■□□ 2.16
ROM1-201ENST00000278833 TTC38Q5R3I4 469 aa28.54■■■□□ 2.16
ROM1-201ENST00000278833 SPTY2D1Q68D10 685 aaPredicted RBP28.54■■■□□ 2.16
ROM1-201ENST00000278833 TAOK2Q9UL54 1235 aa28.54■■■□□ 2.16
ROM1-201ENST00000278833 FAM205CA6NFA0 338 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 ZSCAN12O43309 604 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 SPECC1LQ69YQ0 1117 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 USP49Q70CQ1 688 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 FAM177A1Q8N128 213 aaPredicted RBP28.53■■■□□ 2.16
ROM1-201ENST00000278833 ZNF397Q8NF99 534 aaPredicted RBP28.53■■■□□ 2.16
ROM1-201ENST00000278833 MED15Q96RN5 788 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 A0A1B0GTH6 734 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 STX10O60499 249 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 ZPR1O75312 459 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 PFKFB3Q16875 520 aaPredicted RBP28.53■■■□□ 2.16
ROM1-201ENST00000278833 SRBD1Q8N5C6 995 aaKnown RBP28.53■■■□□ 2.16
ROM1-201ENST00000278833 NAV1Q8NEY1 1877 aa28.53■■■□□ 2.16
ROM1-201ENST00000278833 A0A087X0B3 334 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 SCG2P13521 617 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 GYS1P13807 737 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 GTF2E1P29083 439 aaPredicted RBP28.52■■■□□ 2.16
ROM1-201ENST00000278833 DPYDQ12882 1025 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 CUL4BQ13620 913 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 REXO1L1PQ8IX06 675 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 SYMPKQ92797 1274 aaKnown RBP28.52■■■□□ 2.16
ROM1-201ENST00000278833 PAGE5Q96GU1 130 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 SETDB2Q96T68 719 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 SH3GLB2Q9NR46 395 aa28.52■■■□□ 2.16
ROM1-201ENST00000278833 KLRK1P26718 216 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 MSL1Q68DK7 614 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 MTFR1LQ9H019 292 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 ATF5Q9Y2D1 282 aaPredicted RBP28.51■■■□□ 2.15
ROM1-201ENST00000278833 KIF5BP33176 963 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 NR1I3Q14994 352 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 CCDC178Q5BJE1 867 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 SPATA1Q5VX52 437 aa28.51■■■□□ 2.15
ROM1-201ENST00000278833 PRDM1O75626 825 aa28.5■■■□□ 2.15
ROM1-201ENST00000278833 TRIM65Q6PJ69 517 aa28.5■■■□□ 2.15
ROM1-201ENST00000278833 SYT10Q6XYQ8 523 aa28.5■■■□□ 2.15
ROM1-201ENST00000278833 DHX58Q96C10 678 aa28.5■■■□□ 2.15
ROM1-201ENST00000278833 SRRTQ9BXP5 876 aaKnown RBP28.5■■■□□ 2.15
ROM1-201ENST00000278833 OGFRQ9NZT2 677 aa28.5■■■□□ 2.15
ROM1-201ENST00000278833 MKRN1Q9UHC7 482 aaKnown RBP28.5■■■□□ 2.15
ROM1-201ENST00000278833 CALML3P27482 149 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 CDKAL1Q5VV42 579 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 ARL6IP4Q66PJ3 421 aaKnown RBP28.49■■■□□ 2.15
ROM1-201ENST00000278833 RCSD1Q6JBY9 416 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 APTXQ7Z2E3 356 aaKnown RBP28.49■■■□□ 2.15
ROM1-201ENST00000278833 NBPF5PQ86XG9 351 aaPredicted RBP28.49■■■□□ 2.15
ROM1-201ENST00000278833 DGKHQ86XP1 1220 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 GRAMD1CQ8IYS0 662 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 TC2NQ8N9U0 490 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 TM4SF1P30408 202 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 E2F4Q16254 413 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 TPTE2Q6XPS3 522 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 PDILTQ8N807 584 aa28.49■■■□□ 2.15
ROM1-201ENST00000278833 DDX60LQ5H9U9 1706 aaKnown RBP28.48■■■□□ 2.15
ROM1-201ENST00000278833 EPSTI1Q96J88 318 aa28.48■■■□□ 2.15
ROM1-201ENST00000278833 ATP2B1P20020 1258 aa28.47■■■□□ 2.15
ROM1-201ENST00000278833 PRDX5P30044 214 aa28.47■■■□□ 2.15
ROM1-201ENST00000278833 C15orf52Q6ZUT6 534 aaKnown RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms