RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PHLPP2Q6ZVD8 1323 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 TRIM75PA6NK02 468 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 TPM1P09493 284 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 CALM1P0DP23 149 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 CALM2P0DP24 149 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 CALM3P0DP25 149 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 CYP2D6P10635 497 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 TM4SF1P30408 202 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 ETF1P62495 437 aaKnown RBP25.71■■□□□ 1.71
MCF2L-201ENST00000261963 VPS72Q15906 364 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 PDILTQ8N807 584 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 CRNKL1Q9BZJ0 848 aaKnown RBP25.71■■□□□ 1.71
MCF2L-201ENST00000261963 IRS2Q9Y4H2 1338 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 WNT7AO00755 349 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 GNPATO15228 680 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 CCP110O43303 1012 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 SERPINC1P01008 464 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 TNFRSF25Q93038 417 aa25.71■■□□□ 1.71
MCF2L-201ENST00000261963 SRRTQ9BXP5 876 aaKnown RBP25.71■■□□□ 1.71
MCF2L-201ENST00000261963 DLEC1Q9Y238 1755 aa25.7■■□□□ 1.71
MCF2L-201ENST00000261963 DNAI1Q9UI46 699 aa25.7■■□□□ 1.7
MCF2L-201ENST00000261963 CNTNAP5Q8WYK1 1306 aa25.7■■□□□ 1.7
MCF2L-201ENST00000261963 CBFA2T2O43439 604 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 MYO1BO43795 1136 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 MORC3Q14149 939 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 NOM1Q5C9Z4 860 aaKnown RBP25.69■■□□□ 1.7
MCF2L-201ENST00000261963 FAM47AQ5JRC9 791 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 UBXN6Q9BZV1 441 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 ZPR1O75312 459 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 FMR1Q06787 632 aaKnown RBP eCLIP25.69■■□□□ 1.7
MCF2L-201ENST00000261963 ZNF827Q17R98 1081 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 SRBD1Q8N5C6 995 aaKnown RBP25.69■■□□□ 1.7
MCF2L-201ENST00000261963 SMARCE1Q969G3 411 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 ATP8A2Q9NTI2 1148 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 INTS13Q9NVM9 706 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 JAG2Q9Y219 1238 aa25.69■■□□□ 1.7
MCF2L-201ENST00000261963 A0A087X0B3 334 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 CFAP100Q494V2 611 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 TPTE2Q6XPS3 522 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 SPATA20Q8TB22 786 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 TMEM232C9JQI7 657 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 TNNT3P45378 269 aaPredicted RBP25.68■■□□□ 1.7
MCF2L-201ENST00000261963 ST5P78524 1137 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 VSTM4Q8IW00 320 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 C8orf37Q96NL8 207 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 RASSF4Q9H2L5 321 aa25.68■■□□□ 1.7
MCF2L-201ENST00000261963 SBK1Q52WX2 424 aa25.67■■□□□ 1.7
MCF2L-201ENST00000261963 SLC51AQ86UW1 340 aa25.67■■□□□ 1.7
MCF2L-201ENST00000261963 MYH13Q9UKX3 1938 aa25.67■■□□□ 1.7
MCF2L-201ENST00000261963 EFCAB8A8MWE9 144 aa25.67■■□□□ 1.7
MCF2L-201ENST00000261963 SEC31AO94979 1220 aaKnown RBP25.67■■□□□ 1.7
MCF2L-201ENST00000261963 MLKLQ8NB16 471 aa25.67■■□□□ 1.7
MCF2L-201ENST00000261963 MED15Q96RN5 788 aa25.67■■□□□ 1.7
MCF2L-201ENST00000261963 TADA3O75528 432 aa25.66■■□□□ 1.7
MCF2L-201ENST00000261963 OAS2P29728 719 aaKnown RBP25.66■■□□□ 1.7
MCF2L-201ENST00000261963 EPSTI1Q96J88 318 aa25.66■■□□□ 1.7
MCF2L-201ENST00000261963 ARPP21Q9UBL0 812 aaPredicted RBP25.66■■□□□ 1.7
MCF2L-201ENST00000261963 PTPN21Q16825 1174 aa25.66■■□□□ 1.7
MCF2L-201ENST00000261963 KANK3Q6NY19 840 aa25.66■■□□□ 1.7
MCF2L-201ENST00000261963 ARHGEF1Q92888 912 aaKnown RBP25.66■■□□□ 1.7
MCF2L-201ENST00000261963 NGLY1Q96IV0 654 aa25.66■■□□□ 1.7
MCF2L-201ENST00000261963 ZNF18P17022 549 aa25.65■■□□□ 1.7
MCF2L-201ENST00000261963 TRIML1Q8N9V2 468 aa25.65■■□□□ 1.7
MCF2L-201ENST00000261963 CTCFLQ8NI51 663 aaPredicted RBP25.65■■□□□ 1.7
MCF2L-201ENST00000261963 EFCC1Q9HA90 598 aa25.65■■□□□ 1.7
MCF2L-201ENST00000261963 ZSCAN26Q16670 478 aa25.65■■□□□ 1.7
MCF2L-201ENST00000261963 NFE2L3Q9Y4A8 694 aa25.65■■□□□ 1.7
MCF2L-201ENST00000261963 KIAA1551Q9HCM1 1747 aa25.64■■□□□ 1.7
MCF2L-201ENST00000261963 URI1O94763 535 aaPredicted RBP25.64■■□□□ 1.7
MCF2L-201ENST00000261963 HSP90AA4PQ58FG1 418 aa25.64■■□□□ 1.7
MCF2L-201ENST00000261963 RCSD1Q6JBY9 416 aa25.64■■□□□ 1.7
MCF2L-201ENST00000261963 ENOX1Q8TC92 643 aaKnown RBP25.64■■□□□ 1.7
MCF2L-201ENST00000261963 DHX58Q96C10 678 aa25.64■■□□□ 1.7
MCF2L-201ENST00000261963 TMX1Q9H3N1 280 aa25.64■■□□□ 1.7
MCF2L-201ENST00000261963 CWC15Q9P013 229 aaKnown RBP25.64■■□□□ 1.7
MCF2L-201ENST00000261963 CCNL1Q9UK58 526 aaPredicted RBP25.64■■□□□ 1.7
MCF2L-201ENST00000261963 RTCBQ9Y3I0 505 aaKnown RBP25.64■■□□□ 1.7
MCF2L-201ENST00000261963 LAMB1P07942 1786 aa25.64■■□□□ 1.7
MCF2L-201ENST00000261963 TRMT44Q8IYL2 757 aaKnown RBP25.64■■□□□ 1.69
MCF2L-201ENST00000261963 ZCCHC17Q9NP64 241 aaKnown RBP25.64■■□□□ 1.69
MCF2L-201ENST00000261963 BTAF1O14981 1849 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 TBC1D8O95759 1140 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 VEGFAP15692 232 aaPredicted RBP25.63■■□□□ 1.69
MCF2L-201ENST00000261963 SMC1AQ14683 1233 aaKnown RBP25.63■■□□□ 1.69
MCF2L-201ENST00000261963 ZNF174Q15697 407 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 SYMPKQ92797 1274 aaKnown RBP25.63■■□□□ 1.69
MCF2L-201ENST00000261963 CARD6Q9BX69 1037 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 BRMS1Q9HCU9 246 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 MAST2Q6P0Q8 1798 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 BAZ2BQ9UIF8 2168 aaKnown RBP25.63■■□□□ 1.69
MCF2L-201ENST00000261963 TMED8Q6PL24 325 aaPredicted RBP25.63■■□□□ 1.69
MCF2L-201ENST00000261963 SH3RF1Q7Z6J0 888 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 FERMT2Q96AC1 680 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 MKRN1Q9UHC7 482 aaKnown RBP25.63■■□□□ 1.69
MCF2L-201ENST00000261963 RSPH14Q9UHP6 348 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 DACH1Q9UI36 760 aa25.63■■□□□ 1.69
MCF2L-201ENST00000261963 SASH3O75995 380 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 BMP15O95972 392 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 USP17L8P0C7I0 530 aa25.62■■□□□ 1.69
MCF2L-201ENST00000261963 GOLGA8FQ08AF8 430 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms