RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 VHLLQ6RSH7 139 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
CCDC54-201ENST00000261058 FAM178BQ8IXR5 827 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 FAM86C2PA6NEL3 165 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 B2RBV5 119 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 SHOXO15266 292 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 FURINP09958 794 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 RNF4P78317 190 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 SLC7A5Q01650 507 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 CYP27C1Q4G0S4 372 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 ANKRD39Q53RE8 183 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 LARP1BQ659C4 914 aaKnown RBP6.84□□□□□ -1.32
CCDC54-201ENST00000261058 METTL22Q9BUU2 404 aaPredicted RBP6.84□□□□□ -1.32
CCDC54-201ENST00000261058 PIF1Q9H611 641 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 MKNK2Q9HBH9 465 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 PRDM5Q9NQX1 630 aaPredicted RBP6.84□□□□□ -1.32
CCDC54-201ENST00000261058 PCDHB10Q9UN67 800 aa6.84□□□□□ -1.32
CCDC54-201ENST00000261058 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
CCDC54-201ENST00000261058 CBFA2T2O43439 604 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 CYP7A1P22680 504 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 KIR3DL1P43629 444 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 NFE2L2Q16236 605 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 ZDHHC13Q8IUH4 622 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 SHKBP1Q8TBC3 707 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 Q96M66 194 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 SNTG2Q9NY99 539 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 SUSD2Q9UGT4 822 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 GTF2IRD1Q9UHL9 959 aa6.83□□□□□ -1.32
CCDC54-201ENST00000261058 CDK11AQ9UQ88 783 aaPredicted RBP6.83□□□□□ -1.32
CCDC54-201ENST00000261058 ZNF143P52747 638 aaPredicted RBP6.82□□□□□ -1.32
CCDC54-201ENST00000261058 NBPF9Q3BBW0 867 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 GNPTABQ3T906 1256 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
CCDC54-201ENST00000261058 SFRP5Q5T4F7 317 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 Q8N3U1 123 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 ZNF669Q96BR6 464 aaPredicted RBP6.82□□□□□ -1.32
CCDC54-201ENST00000261058 DEPDC7Q96QD5 511 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 ZSWIM4Q9H7M6 989 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 ST7Q9NRC1 585 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 TPX2Q9ULW0 747 aaKnown RBP6.82□□□□□ -1.32
CCDC54-201ENST00000261058 U3KQE9 123 aa6.82□□□□□ -1.32
CCDC54-201ENST00000261058 FAM221BA6H8Z2 402 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 PRR19A6NJB7 356 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 DDAH1O94760 285 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 OXCT1P55809 520 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 KIAA1211LQ6NV74 962 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 NOP9Q86U38 636 aaKnown RBP6.81□□□□□ -1.32
CCDC54-201ENST00000261058 ZNF513Q8N8E2 541 aaPredicted RBP6.81□□□□□ -1.32
CCDC54-201ENST00000261058 DTWD2Q8NBA8 298 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 ST13P5Q8NFI4 369 aaPredicted RBP6.81□□□□□ -1.32
CCDC54-201ENST00000261058 ZNF512BQ96KM6 892 aaPredicted RBP6.81□□□□□ -1.32
CCDC54-201ENST00000261058 HAUS7Q99871 368 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 KLHL25Q9H0H3 589 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 PRR13Q9NZ81 148 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 CAPN6Q9Y6Q1 641 aa6.81□□□□□ -1.32
CCDC54-201ENST00000261058 PRR33A8MZF0 331 aa6.8□□□□□ -1.32
CCDC54-201ENST00000261058 PDPK1O15530 556 aa6.8□□□□□ -1.32
CCDC54-201ENST00000261058 AUHQ13825 339 aaKnown RBP6.8□□□□□ -1.32
CCDC54-201ENST00000261058 TDRD10Q5VZ19 366 aaKnown RBP6.8□□□□□ -1.32
CCDC54-201ENST00000261058 DUSP27Q5VZP5 1158 aa6.8□□□□□ -1.32
CCDC54-201ENST00000261058 PIWIL2Q8TC59 973 aaKnown RBP6.8□□□□□ -1.32
CCDC54-201ENST00000261058 EPN3Q9H201 632 aa6.8□□□□□ -1.32
CCDC54-201ENST00000261058 WDR64B1ANS9 1081 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 SUSD5O60279 629 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 LRRN2O75325 713 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 SRFP11831 508 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 BMS1Q14692 1282 aaKnown RBP6.79□□□□□ -1.32
CCDC54-201ENST00000261058 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 EEPD1Q7L9B9 569 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 C7orf61Q8IZ16 206 aa6.79□□□□□ -1.32
CCDC54-201ENST00000261058 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
CCDC54-201ENST00000261058 MKRN2Q9H000 416 aaKnown RBP6.79□□□□□ -1.32
CCDC54-201ENST00000261058 ANKRD34BA5PLL1 514 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
CCDC54-201ENST00000261058 EPHX1P07099 455 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 TNK2Q07912 1038 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 NKPD1Q17RQ9 610 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 SLC10A6Q3KNW5 377 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 CCDC144CPQ8IYA2 1237 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 MFSD4AQ8N468 514 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 JMYQ8N9B5 988 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 ATG3Q9NT62 314 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 ZNF451Q9Y4E5 1061 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 ST14Q9Y5Y6 855 aa6.78□□□□□ -1.32
CCDC54-201ENST00000261058 TP53P04637 393 aaPredicted RBP6.77□□□□□ -1.33
CCDC54-201ENST00000261058 FOSL1P15407 271 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 CD247P20963 164 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 ITGB7P26010 798 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 GIMAP6Q6P9H5 292 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 GPR62Q9BZJ7 368 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 PRDM14Q9GZV8 571 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 PIM2Q9P1W9 311 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 PLAGL2Q9UPG8 496 aa6.77□□□□□ -1.33
CCDC54-201ENST00000261058 PCDHB12Q9Y5F1 795 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms