RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 REREQ9P2R6 1566 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 H7C1W4 665 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 VAV2P52735 878 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 TYW1BQ6NUM6 668 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 NLRP10Q86W26 655 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 TEX33O43247 280 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 ATP1A2P50993 1020 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 TUBB4BP68371 445 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 GSTO1P78417 241 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 WHAMMP3Q1A5X7 153 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 LSM14BQ9BX40 385 aaKnown RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 CDC42BPGQ6DT37 1551 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 MAP3K15Q6ZN16 1313 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 TADA3O75528 432 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 DCAF17Q5H9S7 520 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 ZSCAN10Q96SZ4 725 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 LRRC27Q9C0I9 530 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 ANKRD62A6NC57 917 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 ERVV-2B6SEH9 535 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 CYP2D6P10635 497 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 HNRNPH2P55795 449 aaKnown RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 TUBB2AQ13885 445 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 LCORLQ8N3X6 602 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 TUBB2BQ9BVA1 445 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.16□□□□□ -1.583e-10■■■■■ 94.2
VPS13C-201ENST00000249837 DIP2CQ9Y2E4 1556 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 BICDL2A1A5D9 508 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 NBPF26B4DH59 902 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 ANKRD65E5RJM6 399 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 CTDNEP1O95476 244 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 FOXO4P98177 505 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 NBPF14Q5TI25 921 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 NBPF10Q6P3W6 841 aaKnown RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 NELFCDQ8IXH7 590 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 NBPF15Q8N660 670 aa5.16□□□□□ -1.58
VPS13C-201ENST00000249837 IRX2Q9BZI1 471 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 EPN1Q9Y6I3 576 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-201ENST00000249837 MED23Q9ULK4 1368 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 MAP2K1Q02750 393 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-201ENST00000249837 PLS1Q14651 629 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 MTF1Q14872 753 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 MICALCLQ6ZW33 695 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 SRGAP1Q7Z6B7 1085 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 TBC1D10CQ8IV04 446 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 ENOX1Q8TC92 643 aaKnown RBP5.15□□□□□ -1.58
VPS13C-201ENST00000249837 UBLCP1Q8WVY7 318 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-201ENST00000249837 RRP36Q96EU6 259 aaKnown RBP5.15□□□□□ -1.58
VPS13C-201ENST00000249837 FUCA2Q9BTY2 467 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 B4DLN1 442 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 RIMBP2O15034 1052 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 CCNT1O60563 726 aaKnown RBP5.15□□□□□ -1.58
VPS13C-201ENST00000249837 FMNL1O95466 1100 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-201ENST00000249837 PAGE5Q96GU1 130 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 SEC31BQ9NQW1 1179 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 SAR1BQ9Y6B6 198 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 KIF28PB7ZC32 967 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 CYP27A1Q02318 531 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 UBE3CQ15386 1083 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 CCDC114Q96M63 670 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 OXER1Q8TDS5 423 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 GDAQ9Y2T3 454 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 GOLGA6CA6NDK9 693 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 ENC1O14682 589 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 GOLGA6DP0CG33 693 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 IFNAR1P17181 557 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 TECP42680 631 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 CABP7Q86V35 215 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 KCNB2Q92953 911 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 WDR24Q96S15 920 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 GOLGA6AQ9NYA3 693 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 MROH5Q6ZUA9 1318 aa5.15□□□□□ -1.58
VPS13C-201ENST00000249837 KAT6AQ92794 2004 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 PPP1R12BO60237 982 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-201ENST00000249837 GNA11P29992 359 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 PPARAQ07869 468 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 CYB5R4Q7L1T6 521 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 TGFBRAP1Q8WUH2 860 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 SECISBP2LQ93073 1101 aaKnown RBP5.15□□□□□ -1.59
VPS13C-201ENST00000249837 VWDEQ8N2E2 1590 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 TRIM14Q14142 442 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 KRT31Q15323 416 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 HLFQ16534 295 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 MCAMP43121 646 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 LIG3P49916 1009 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 ASIC2Q16515 512 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 CALCRLQ16602 461 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 TSGA10IPQ3SY00 556 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 BLIDQ8IZY5 108 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC155Q8N6L0 562 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 NOX5Q96PH1 765 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 DENND2AQ9ULE3 1009 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 IKBKBO14920 756 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 CEP104O60308 925 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 SV2BQ7L1I2 683 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 CEP170BQ9Y4F5 1589 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-201ENST00000249837 GOLGA6L10A0A0M3HER8 536 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 SMCO2A6NFE2 343 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 CDC27P30260 824 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 GNGT1P63211 74 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 EXOSC10Q01780 885 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms