RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ZSWIM5Q9P217 1185 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 HPS5Q9UPZ3 1129 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 STK36Q9NRP7 1315 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 PTPRFP10586 1907 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 PHIPQ8WWQ0 1821 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 KIAA0100Q14667 2235 aaKnown RBP15.38■□□□□ 0.05
SLIRP-201ENST00000238688 CCDC69A6NI79 296 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 MINDY4BA8MYZ0 360 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 USP17L12C9JPN9 530 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 USP17L21D6R901 530 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
SLIRP-201ENST00000238688 ZBTB43O43298 467 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 MBD3O95983 291 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 BTDP43251 543 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 WTAPQ15007 396 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 PPP4R3BQ5MIZ7 849 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 WASF1Q92558 559 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
SLIRP-201ENST00000238688 MTMR6Q9Y217 621 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 CSADQ9Y600 493 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 SLC12A7Q9Y666 1083 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 ZSWIM8A7E2V4 1837 aa15.38■□□□□ 0.05
SLIRP-201ENST00000238688 MYH6P13533 1939 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 IRF6O14896 467 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
SLIRP-201ENST00000238688 SLURP2P0DP57 97 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 METAP2P50579 478 aaKnown RBP eCLIP15.37■□□□□ 0.057e-8■□□□□ 9.9
SLIRP-201ENST00000238688 RHBDL3P58872 404 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 CTDSPL2Q05D32 466 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 PKN2Q16513 984 aaKnown RBP15.37■□□□□ 0.05
SLIRP-201ENST00000238688 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 FAM43AQ8N2R8 423 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
SLIRP-201ENST00000238688 TCP11L1Q9NUJ3 509 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 MCM9Q9NXL9 1143 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
SLIRP-201ENST00000238688 HTTP42858 3142 aa15.37■□□□□ 0.05
SLIRP-201ENST00000238688 CCL15-CCL14A0A0B4J2E2 113 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 DDAH1O94760 285 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 GTF2A2P52657 109 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 PKP1Q13835 747 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 COL9A3Q14050 684 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-201ENST00000238688 CCL15Q16663 113 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 KLHL40Q2TBA0 621 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 DCAF15Q66K64 600 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 FBXO46Q6PJ61 603 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-201ENST00000238688 NFXL1Q6ZNB6 911 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 TEX11Q8IYF3 940 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 HOOK2Q96ED9 719 aa15.36■□□□□ 0.05
SLIRP-201ENST00000238688 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
SLIRP-201ENST00000238688 TNRC18O15417 2968 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-201ENST00000238688 PHF20L1A8MW92 1017 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 ENTPD3O75355 529 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 SOX10P56693 466 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 MAP3K10Q02779 954 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 STK3Q13188 491 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 PPIL2Q13356 520 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 SEC23AQ15436 765 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 OTUD7BQ6GQQ9 843 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 TTC6Q86TZ1 520 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 DGKHQ86XP1 1220 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-201ENST00000238688 SH3RF3Q8TEJ3 882 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-201ENST00000238688 ANKS1AQ92625 1134 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 ZSCAN10Q96SZ4 725 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-201ENST00000238688 TOMM22Q9NS69 142 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 RBM27Q9P2N5 1060 aaKnown RBP15.35■□□□□ 0.05
SLIRP-201ENST00000238688 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 DOCK1Q14185 1865 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
SLIRP-201ENST00000238688 DDTLA6NHG4 134 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 BTBD19C9JJ37 291 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 H3BQV1 296 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 TRAK2O60296 914 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 IFNAR1P17181 557 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 MLLT1Q03111 559 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 PPATQ06203 517 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 MOGSQ13724 837 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 NOL9Q5SY16 702 aaKnown RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 CATIPQ7Z7H3 387 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 CD99L2Q8TCZ2 262 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 DHX36Q9H2U1 1008 aaKnown RBP15.34■□□□□ 0.05
SLIRP-201ENST00000238688 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 ELP1O95163 1332 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 TNKSO95271 1327 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 FLT1P17948 1338 aa15.34■□□□□ 0.05
SLIRP-201ENST00000238688 GOLGA8AA7E2F4 631 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 POLR3DP05423 398 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms