RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 CLEC10AQ8IUN9 316 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 NLRP5P59047 1200 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 HEATR3Q7Z4Q2 680 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNFAIP3-201ENST00000237289 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 VGLL4Q14135 290 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 DLK2Q6UY11 383 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 OPTNQ96CV9 577 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 ATP6V1DQ9Y5K8 247 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 SLURP2P0DP57 97 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 STAT2P52630 851 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 DCAF4Q8WV16 495 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
TNFAIP3-201ENST00000237289 CETPP11597 493 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 GTF2A2P52657 109 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 LPAR1Q92633 364 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 GOLGA6L4A6NEF3 574 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 SNX21Q969T3 373 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 SMIM22K7EJ46 135 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 NAPAP54920 295 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 FSTL1Q12841 308 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCDC148Q8NFR7 591 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 PPATQ06203 517 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCL15Q16663 113 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
TNFAIP3-201ENST00000237289 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 GABPAQ06546 454 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 HOXC10Q9NYD6 342 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 PTPRAP18433 802 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 BACE1P56817 501 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 DEFB115Q30KQ5 88 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 EXOSC10Q01780 885 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 EVX2Q03828 476 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 CXCL11O14625 94 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 SLC16A2P36021 539 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 GJB2P29033 226 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 NUCB2P80303 420 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 ME3Q16798 604 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 KCNB2Q92953 911 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 RPAP3Q9H6T3 665 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 EHMT1Q9H9B1 1298 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms