RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF711Q9Y462 761 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 CALCOCO2Q13137 446 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 CABP1Q9NZU7 370 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 RNF14Q9UBS8 474 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 KDM5BQ9UGL1 1544 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 LARGE1O95461 756 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 CCNHP51946 323 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-201ENST00000236192 RAD23BP54727 409 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 SIRT2Q8IXJ6 389 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 MORC4Q8TE76 937 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 PNKPQ96T60 521 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 PLAAQ9Y263 795 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 SH3BP1Q9Y3L3 701 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 ADGRG1Q9Y653 693 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 ADGRL1O94910 1474 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 NESP48681 1621 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 CNGA1P29973 690 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 USP5P45974 858 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 ECT2Q9H8V3 914 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 LCA5Q86VQ0 697 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
VAMP4-201ENST00000236192 CYFIP2Q96F07 1278 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
VAMP4-201ENST00000236192 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-201ENST00000236192 CETN2P41208 172 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 TRIM74Q86UV6 250 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 TRIM73Q86UV7 250 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 USP6NLQ92738 828 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 ZNF653Q96CK0 615 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 STAP2Q9UGK3 403 aa14.22□□□□□ -0.13
VAMP4-201ENST00000236192 RNF8O76064 485 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 TRIM37O94972 964 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 STAT6P42226 847 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 MRPL12P52815 198 aaKnown RBP14.21□□□□□ -0.13
VAMP4-201ENST00000236192 PTGISQ16647 500 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 SLC44A4Q53GD3 710 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 ATP5HO75947 161 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 POLD1P28340 1107 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 PPP2R2AP63151 447 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 WDR93Q6P2C0 686 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 PARD3BQ8TEW8 1205 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 RHBDL2Q9NX52 303 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 PLXNC1O60486 1568 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 MAGI2Q86UL8 1455 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 HS2ST1Q7LGA3 356 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 KIAA0825Q8IV33 1275 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 ELAC2Q9BQ52 826 aaKnown RBP14.21□□□□□ -0.13
VAMP4-201ENST00000236192 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
VAMP4-201ENST00000236192 ZNF330Q9Y3S2 320 aaPredicted RBP14.21□□□□□ -0.13
VAMP4-201ENST00000236192 LRRIQ3A6PVS8 624 aaPredicted RBP14.21□□□□□ -0.14
VAMP4-201ENST00000236192 ERCC5P28715 1186 aaPredicted RBP14.21□□□□□ -0.14
VAMP4-201ENST00000236192 RPS6KA3P51812 740 aa14.21□□□□□ -0.14
VAMP4-201ENST00000236192 SLC7A5Q01650 507 aa14.21□□□□□ -0.14
VAMP4-201ENST00000236192 RPS6KA1Q15418 735 aa14.21□□□□□ -0.14
VAMP4-201ENST00000236192 ANKRD42Q8N9B4 389 aa14.21□□□□□ -0.14
VAMP4-201ENST00000236192 CHMP6Q96FZ7 201 aa14.21□□□□□ -0.14
VAMP4-201ENST00000236192 SEC16BQ96JE7 1060 aa14.21□□□□□ -0.14
VAMP4-201ENST00000236192 ALDH1L1O75891 902 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 TROVE2P10155 538 aaKnown RBP eCLIP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 ROR2Q01974 943 aaKnown RBP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 ANKRD27Q96NW4 1050 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 ANGPTL2Q9UKU9 493 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 TRIM75PA6NK02 468 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 ATP5JP18859 108 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 PTH1RQ03431 593 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 CCNI2Q6ZMN8 369 aaPredicted RBP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 CEP70Q8NHQ1 597 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 ENOX1Q8TC92 643 aaKnown RBP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 STAMBPL1Q96FJ0 436 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 KRT12Q99456 494 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 NOC4LQ9BVI4 516 aaKnown RBP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 SATB2Q9UPW6 733 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 CD2APQ9Y5K6 639 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 MFAP3LO75121 409 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 ATP6V1G2O95670 118 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 MFSD4BQ5TF39 518 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 TRIM31Q9BZY9 425 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 TMCC1O94876 653 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 BAG2O95816 211 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 MYBL2P10244 700 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 EIF3BP55884 814 aaKnown RBP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 NGDNQ8NEJ9 315 aaKnown RBP14.2□□□□□ -0.14
VAMP4-201ENST00000236192 PARP2Q9UGN5 583 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 NFU1Q9UMS0 254 aa14.2□□□□□ -0.14
VAMP4-201ENST00000236192 TMEM232C9JQI7 657 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 GSDMBQ8TAX9 411 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 RAB21Q9UL25 225 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 PRC1O43663 620 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 ZNF189O75820 626 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-201ENST00000236192 IFNAR2P48551 515 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 APBB1IPQ7Z5R6 666 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-201ENST00000236192 PLVAPQ9BX97 442 aa14.19□□□□□ -0.14
VAMP4-201ENST00000236192 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms