RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 STX17P56962 302 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 TRAPPC11Q7Z392 1133 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 KAT14Q9H8E8 782 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 LY75O60449 1722 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 ITIH6Q6UXX5 1313 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 SYNRGQ9UMZ2 1314 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 GGCXP38435 758 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 PSEN1P49768 467 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 FILIP1LQ4L180 1135 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 CTAGE1Q96RT6 745 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 FAM169AQ9Y6X4 670 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 RANBP6O60518 1105 aaKnown RBP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 TOB1P50616 345 aaPredicted RBP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 CUL4BQ13620 913 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 KLHL10Q6JEL2 608 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 KANK3Q6NY19 840 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 FAM76AQ8TAV0 307 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 SH2B2O14492 632 aaPredicted RBP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 CD44P16070 742 aaKnown RBP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 IL15P40933 162 aaPredicted RBP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 FKBP4Q02790 459 aaKnown RBP eCLIP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 CT47A1Q5JQC4 288 aaPredicted RBP19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 APOA5Q6Q788 366 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 NOSTRINQ8IVI9 506 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 BCORQ6W2J9 1755 aa19.95■□□□□ 0.78
CDKN1B-201ENST00000228872 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 IRAK1P51617 712 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 CYP26C1Q6V0L0 522 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 NKX2-3Q8TAU0 364 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 SLF1Q9BQI6 1058 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 ABHD10Q9NUJ1 306 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 UBN2Q6ZU65 1347 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 UBE2Q2LH0YL09 131 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 AGPSO00116 658 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 EBAG9O00559 213 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 HNRNPH1P31943 449 aaKnown RBP19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 NTRK3Q16288 839 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 CYB5R4Q7L1T6 521 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 MICU3Q86XE3 530 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 SECISBP2LQ93073 1101 aaKnown RBP19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 SPEF2Q9C093 1822 aa19.94■□□□□ 0.78
CDKN1B-201ENST00000228872 TARSL2A2RTX5 802 aaKnown RBP19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 SEMA3EO15041 775 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 GDAP1L1Q96MZ0 367 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 MMS19Q96T76 1030 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 CRACR2AQ9BSW2 395 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 NBPF3Q9H094 633 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 CXorf56Q9H5V9 222 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 SENP2Q9HC62 589 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 ZFYP08048 801 aaPredicted RBP19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 HLFQ16534 295 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 KCNV1Q6PIU1 500 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 ZNF579Q8NAF0 562 aaKnown RBP19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 PUS7LQ9H0K6 701 aaKnown RBP19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 BRWD3Q6RI45 1802 aa19.93■□□□□ 0.78
CDKN1B-201ENST00000228872 RNF225M0QZC1 329 aaPredicted RBP19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 LRRC24Q50LG9 513 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 SEPT12Q8IYM1 358 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 HDAC6Q9UBN7 1215 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 TRIM10Q9UDY6 481 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 GOLGA6CA6NDK9 693 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 BTBD18B2RXH4 712 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 PCCAP05165 728 aaPredicted RBP19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 GOLGA6DP0CG33 693 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 FBXW10Q5XX13 1052 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 APPBP2Q92624 585 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 GOLGA6AQ9NYA3 693 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 MYH3P11055 1940 aa19.92■□□□□ 0.78
CDKN1B-201ENST00000228872 PSMD14O00487 310 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 CDC25AP30304 524 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 USP49Q70CQ1 688 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 GSPT2Q8IYD1 628 aaKnown RBP19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 FAM217BQ9NTX9 383 aaPredicted RBP19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 GUCA1BQ9UMX6 200 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 REXO2Q9Y3B8 237 aaKnown RBP19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 ENC1O14682 589 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 MNAT1P51948 309 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 PPFIA1Q13136 1202 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 TBC1D10CQ8IV04 446 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 SELENOOQ9BVL4 669 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 EHD4Q9H223 541 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 ECM29Q5VYK3 1845 aa19.91■□□□□ 0.78
CDKN1B-201ENST00000228872 GOLGA8AA7E2F4 631 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 EYA2O00167 538 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 ZBTB43O43298 467 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 ZMYND10O75800 440 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 MYBL2P10244 700 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 CCT6AP40227 531 aaKnown RBP19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 ZNF594Q96JF6 807 aaPredicted RBP19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 SLC26A6Q9BXS9 759 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 GPAA1O43292 621 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 POTEDQ86YR6 584 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms