RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 USP17L2Q6R6M4 530 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
RPA3-201ENST00000223129 SPICE1Q8N0Z3 855 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 IGDCC4Q8TDY8 1250 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 TTC14Q96N46 770 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 MTMR7Q9Y216 660 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 TESPA1A2RU30 521 aaPredicted RBP17.64■□□□□ 0.41
RPA3-201ENST00000223129 MAP2K2P36507 400 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 EXOSC10Q01780 885 aaKnown RBP17.64■□□□□ 0.41
RPA3-201ENST00000223129 TREML2Q5T2D2 321 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 DGKHQ86XP1 1220 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 SH2D4AQ9H788 454 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
RPA3-201ENST00000223129 TMOD4Q9NZQ9 345 aa17.64■□□□□ 0.41
RPA3-201ENST00000223129 PSMA5P28066 241 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 USP14P54578 494 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 ANAPC15P60006 121 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 TMEM67Q5HYA8 995 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 GPAT2Q6NUI2 795 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 UPF3BQ9BZI7 483 aaKnown RBP17.63■□□□□ 0.41
RPA3-201ENST00000223129 VCPKMTQ9H867 229 aa17.63■□□□□ 0.41
RPA3-201ENST00000223129 ERICH2A1L162 156 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 BTBD19C9JJ37 291 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 F5H6K3 240 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 IGF2BP3O00425 579 aaKnown RBP eCLIP17.62■□□□□ 0.41
RPA3-201ENST00000223129 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
RPA3-201ENST00000223129 TOP1P11387 765 aaKnown RBP17.62■□□□□ 0.41
RPA3-201ENST00000223129 TM4SF4P48230 202 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 KLRC3Q07444 240 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 PPP4R3BQ5MIZ7 849 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 IFIT1BQ5T764 474 aaKnown RBP17.62■□□□□ 0.41
RPA3-201ENST00000223129 FASTKD5Q7L8L6 764 aaKnown RBP17.62■□□□□ 0.41
RPA3-201ENST00000223129 RASGRP2Q7LDG7 609 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 ANKS1AQ92625 1134 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 ZSWIM6Q9HCJ5 1215 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 RPS6KB1P23443 525 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 INHBEP58166 350 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 SREBF2Q12772 1141 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 WTAPQ15007 396 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 SART3Q15020 963 aaKnown RBP17.62■□□□□ 0.41
RPA3-201ENST00000223129 GOPCQ9HD26 462 aa17.62■□□□□ 0.41
RPA3-201ENST00000223129 VCAM1P19320 739 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
RPA3-201ENST00000223129 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 IFNL1Q8IU54 200 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 PROCA1Q8NCQ7 364 aaPredicted RBP17.61■□□□□ 0.41
RPA3-201ENST00000223129 TMEM87BQ96K49 555 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 C12orf42Q96LP6 360 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 NUP88Q99567 741 aaPredicted RBP17.61■□□□□ 0.41
RPA3-201ENST00000223129 TM6SF1Q9BZW5 370 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 LY9Q9HBG7 655 aa17.61■□□□□ 0.41
RPA3-201ENST00000223129 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
RPA3-201ENST00000223129 NDUFB10O96000 172 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 KAT14Q9H8E8 782 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 CYP46A1Q9Y6A2 500 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 Q6ZUG5 572 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 IL17RAQ96F46 866 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 KIF2CQ99661 725 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 AGTPBP1Q9UPW5 1226 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 LOC285556D6RIA3 1793 aa17.6■□□□□ 0.41
RPA3-201ENST00000223129 PDHXO00330 501 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 ANKRD23Q86SG2 305 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 GMCL1P1Q8NEA9 526 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 LPAR1Q92633 364 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 RPAP3Q9H6T3 665 aaPredicted RBP17.59■□□□□ 0.41
RPA3-201ENST00000223129 WDR19Q8NEZ3 1342 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 THSD7BQ9C0I4 1608 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 FAM83BQ5T0W9 1011 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 SYNPO2Q9UMS6 1093 aa17.59■□□□□ 0.41
RPA3-201ENST00000223129 FGD1P98174 961 aa17.58■□□□□ 0.4
RPA3-201ENST00000223129 NFXL1Q6ZNB6 911 aa17.58■□□□□ 0.4
RPA3-201ENST00000223129 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
RPA3-201ENST00000223129 CYP2C8P10632 490 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 LIFRP42702 1097 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 KCTD1Q719H9 257 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 ISY1Q9ULR0 285 aaKnown RBP17.57■□□□□ 0.4
RPA3-201ENST00000223129 WDR46O15213 610 aaKnown RBP17.57■□□□□ 0.4
RPA3-201ENST00000223129 PDHBP11177 359 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 HOXA7P31268 230 aaPredicted RBP17.57■□□□□ 0.4
RPA3-201ENST00000223129 SLC1A4P43007 532 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 OTUD7BQ6GQQ9 843 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 CATSPERGQ6ZRH7 1159 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 RAB11FIP4Q86YS3 637 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
RPA3-201ENST00000223129 MYL10Q9BUA6 226 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 TANGO6Q9C0B7 1094 aa17.57■□□□□ 0.4
RPA3-201ENST00000223129 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L15C9J2P7 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L13C9JLJ4 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L11C9JVI0 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L18D6R9N7 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L22D6RA61 530 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms