RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 GNPATO15228 680 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 ARHGAP6O43182 974 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 LDHCP07864 332 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 PRR29P0C7W0 189 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 TM4SF1P30408 202 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 NLRP5P59047 1200 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 FAM196AQ6ZSG2 479 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 TFCP2L1Q9NZI6 479 aa23.95■■□□□ 1.42
CCDC130-201ENST00000221554 SLU7O95391 586 aaKnown RBP23.94■■□□□ 1.42
CCDC130-201ENST00000221554 BAG3O95817 575 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 TBX2Q13207 712 aaPredicted RBP23.94■■□□□ 1.42
CCDC130-201ENST00000221554 ARL6IP4Q66PJ3 421 aaKnown RBP23.94■■□□□ 1.42
CCDC130-201ENST00000221554 SPECC1LQ69YQ0 1117 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 PDILTQ8N807 584 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 DHX58Q96C10 678 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 SHISA4Q96DD7 197 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 KAT14Q9H8E8 782 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 IRS2Q9Y4H2 1338 aa23.94■■□□□ 1.42
CCDC130-201ENST00000221554 PRDX5P30044 214 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 PPP4R3BQ5MIZ7 849 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 SPATA1Q5VX52 437 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 C15orf52Q6ZUT6 534 aaKnown RBP23.93■■□□□ 1.42
CCDC130-201ENST00000221554 IQUBQ8NA54 791 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 PAGE5Q96GU1 130 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 CTAGE1Q96RT6 745 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 L2HGDHQ9H9P8 463 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 TCP11L1Q9NUJ3 509 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 STX10O60499 249 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 LDHBP07195 334 aaKnown RBP23.93■■□□□ 1.42
CCDC130-201ENST00000221554 KLRK1P26718 216 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 NPY5RQ15761 445 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 C12orf60Q5U649 245 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 GALNT17Q6IS24 598 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 SYMPKQ92797 1274 aaKnown RBP23.93■■□□□ 1.42
CCDC130-201ENST00000221554 ZNF287Q9HBT7 754 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 MCM9Q9NXL9 1143 aa23.93■■□□□ 1.42
CCDC130-201ENST00000221554 SRP68Q9UHB9 627 aaKnown RBP23.93■■□□□ 1.42
CCDC130-201ENST00000221554 CCNL1Q9UK58 526 aaPredicted RBP23.93■■□□□ 1.42
CCDC130-201ENST00000221554 PHLPP2Q6ZVD8 1323 aa23.92■■□□□ 1.42
CCDC130-201ENST00000221554 SMIM22K7EJ46 135 aa23.92■■□□□ 1.42
CCDC130-201ENST00000221554 PPP4CP60510 307 aa23.92■■□□□ 1.42
CCDC130-201ENST00000221554 NPHP1O15259 732 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 TRIM37O94972 964 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 USP5P45974 858 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 ETF1P62495 437 aaKnown RBP23.91■■□□□ 1.42
CCDC130-201ENST00000221554 PTGDRQ13258 359 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 GRAPQ13588 217 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 ZNF174Q15697 407 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 GRAPLQ8TC17 118 aaPredicted RBP23.91■■□□□ 1.42
CCDC130-201ENST00000221554 ROBO3Q96MS0 1386 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 FMR1Q06787 632 aaKnown RBP eCLIP23.91■■□□□ 1.42
CCDC130-201ENST00000221554 DPYDQ12882 1025 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 SEMA3FQ13275 785 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 EARS2Q5JPH6 523 aaKnown RBP23.91■■□□□ 1.42
CCDC130-201ENST00000221554 FAM47AQ5JRC9 791 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 USP49Q70CQ1 688 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 ZNF804AQ7Z570 1209 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 HOMER1Q86YM7 354 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 ARHGEF1Q92888 912 aaKnown RBP23.91■■□□□ 1.42
CCDC130-201ENST00000221554 EPSTI1Q96J88 318 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 LZTS2Q9BRK4 669 aa23.91■■□□□ 1.42
CCDC130-201ENST00000221554 LONP1P36776 959 aaKnown RBP23.9■■□□□ 1.42
CCDC130-201ENST00000221554 NR1I3Q14994 352 aa23.9■■□□□ 1.42
CCDC130-201ENST00000221554 SRRTQ9BXP5 876 aaKnown RBP23.9■■□□□ 1.42
CCDC130-201ENST00000221554 MKRN1Q9UHC7 482 aaKnown RBP23.9■■□□□ 1.42
CCDC130-201ENST00000221554 FAM205CA6NFA0 338 aa23.89■■□□□ 1.42
CCDC130-201ENST00000221554 RFC4P35249 363 aa23.89■■□□□ 1.42
CCDC130-201ENST00000221554 TXLNAP40222 546 aa23.89■■□□□ 1.42
CCDC130-201ENST00000221554 FILIP1LQ4L180 1135 aa23.89■■□□□ 1.42
CCDC130-201ENST00000221554 RCSD1Q6JBY9 416 aa23.89■■□□□ 1.42
CCDC130-201ENST00000221554 BAG1Q99933 345 aaPredicted RBP23.89■■□□□ 1.42
CCDC130-201ENST00000221554 ANKIB1Q9P2G1 1089 aa23.89■■□□□ 1.42
CCDC130-201ENST00000221554 XDHP47989 1333 aa23.89■■□□□ 1.41
CCDC130-201ENST00000221554 A0A1B0GTH6 734 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 TFAP4Q01664 338 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 TRAPPC3LQ5T215 181 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 SMAP1Q8IYB5 467 aaPredicted RBP23.88■■□□□ 1.41
CCDC130-201ENST00000221554 BLIDQ8IZY5 108 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 CCDC148Q8NFR7 591 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 INTS13Q9NVM9 706 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 RMND1Q9NWS8 449 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 hCG_1642624A0A1W2PR95 340 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 TMEM232C9JQI7 657 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 KCNQ4P56696 695 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 GRM4Q14833 912 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 GRAMD1CQ8IYS0 662 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 MKNK2Q9HBH9 465 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 ZNF215Q9UL58 517 aaPredicted RBP23.88■■□□□ 1.41
CCDC130-201ENST00000221554 PCDHA4Q9UN74 947 aa23.88■■□□□ 1.41
CCDC130-201ENST00000221554 VWA3AA6NCI4 1184 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 CYP2D6P10635 497 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 CUL4BQ13620 913 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 SYT10Q6XYQ8 523 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 PIK3AP1Q6ZUJ8 805 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 ZNF444Q8N0Y2 327 aaPredicted RBP23.87■■□□□ 1.41
CCDC130-201ENST00000221554 PNMA1Q8ND90 353 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 NAA15Q9BXJ9 866 aaKnown RBP23.87■■□□□ 1.41
CCDC130-201ENST00000221554 SYNRGQ9UMZ2 1314 aa23.87■■□□□ 1.41
CCDC130-201ENST00000221554 A0A087X0B3 334 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 GTPBP6O43824 516 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms