RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LIG3P49916 1009 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 TBCCQ15814 346 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 ARHGAP44Q17R89 818 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 TYW1Q9NV66 732 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 SLC13A4Q9UKG4 626 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 WBP4O75554 376 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 KRIT1O00522 736 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 ASPHQ12797 758 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 GRAMD4Q6IC98 578 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 ARHGAP6O43182 974 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 KLHL30Q0D2K2 578 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 CCDC159P0C7I6 412 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 TRIM60Q495X7 471 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 CAPS2Q9BXY5 557 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 ADAT2Q7Z6V5 191 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 FAM8A1Q9UBU6 413 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 INTUQ9ULD6 942 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 PMS1P54277 932 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 POLE2P56282 527 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 NME8Q8N427 588 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 RMDN2Q96LZ7 410 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 RAB44Q7Z6P3 723 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 GRK7Q8WTQ7 553 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 EVI5O60447 810 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 ABCB4P21439 1286 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 ATP6V1E2Q96A05 226 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 PRPSAP1Q14558 356 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 KRT80Q6KB66 452 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 GABPB1Q06547 395 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 MCUQ8NE86 351 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 CENPKQ9BS16 269 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 UBN1Q9NPG3 1134 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 KCNK3O14649 394 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 CDV3Q9UKY7 258 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-201ENST00000216484 FAM180AQ6UWF9 173 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 TTC30BQ8N4P2 665 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 SLC9A5Q14940 896 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 PTPROQ16827 1216 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 ANGPTL8Q6UXH0 198 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 FIS1Q9Y3D6 152 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 NUMA1Q14980 2115 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 TEKT1Q969V4 418 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 EFHD1Q9BUP0 239 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 ABCC11Q96J66 1382 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 DNM2P50570 870 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 CALCRLQ16602 461 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 RAB20Q9NX57 234 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 DAAM1Q9Y4D1 1078 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 KAT6AQ92794 2004 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 LRMPQ12912 555 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 USP6NLQ92738 828 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 AK2P54819 239 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 KIF9Q9HAQ2 790 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 SCOCQ9UIL1 159 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 RIMBP2O15034 1052 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 ART3Q13508 389 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
SPTLC2-201ENST00000216484 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 USH1GQ495M9 461 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 RINT1Q6NUQ1 792 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 FAM95CA0A1B0GW59 222 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 SYCE1LA8MT33 242 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 IMPACTQ9P2X3 320 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 SLC4A1P02730 911 aa16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
SPTLC2-201ENST00000216484 GOLGA8KD6RF30 607 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 RPGRIP1Q96KN7 1286 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 CCDC61Q9Y6R9 512 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 MMS19Q96T76 1030 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 GPC4O75487 556 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 KCNA4P22459 653 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 CAPN11Q9UMQ6 739 aa16.02■□□□□ 0.15
SPTLC2-201ENST00000216484 INHBAP08476 426 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 RRAGAQ7L523 313 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 SZRD1Q7Z422 152 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 TEX11Q8IYF3 940 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 ARHGEF10LQ9HCE6 1279 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms