RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Cdc27A2A6Q5 825 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Kif3cO35066 796 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tubb4bP68372 445 aaKnown RBP8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Fam89aQ14BJ1 175 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Trappc10Q3TLI0 1259 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Igsf3Q6ZQA6 1194 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Prpf40bQ80W14 870 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Bsdc1Q80Y55 427 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 4932429P05RikA2ADI4 785 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm5934D3Z4U6 212 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Atp1b3P97370 278 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Dpf2Q61103 391 aaKnown RBP8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gpbp1Q6NXH3 473 aaKnown RBP8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Kdm1aQ6ZQ88 853 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Hgh1Q8C3I8 393 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Cdan1Q8CC12 1239 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Fam193aQ8CGI1 1231 aaKnown RBP8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Q8K2W9 541 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Stn1Q8K2X3 378 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Znf287Q9EQB9 759 aa8.44□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Btn2a2A4QPC6 514 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Fam186bD3Z420 943 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tubb2aQ7TMM9 445 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tc2nQ91XT6 489 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tubb2bQ9CWF2 445 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Mrpl12Q9DB15 201 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Knop1Q9Z2Q2 478 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 ByslO54825 436 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Il7P10168 154 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Il15P48346 162 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Kcnd1Q03719 651 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Top1Q04750 767 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Zrsr2Q62377 462 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Secisbp2lQ6A098 1086 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Hdac4Q6NZM9 1076 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Glis3Q6XP49 780 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 NenfQ9CQ45 171 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ndufb9Q9CQJ8 179 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Psrc1Q9D0P7 329 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Copb1Q9JIF7 953 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 DonsonQ9QXP4 560 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gja10Q9WUS4 505 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Odf2A3KGV1 830 aaKnown RBP8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ube3aO08759 870 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Asnsd1Q8BFS9 627 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Slc39a11Q8BWY7 342 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Slc13a4Q8BZ82 625 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tada3Q8R0L9 432 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Sirt2Q8VDQ8 389 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Thap2Q9D305 217 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 PdclQ9DBX2 301 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Trip6Q9Z1Y4 480 aa8.43□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gucy2cQ3UWA6 1072 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Cdc23Q8BGZ4 597 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Rufy1Q8BIJ7 712 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Smc1aQ9CU62 1233 aaKnown RBP8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Mfap3lQ9D3X9 409 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 MthfslL7N466 203 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Nmt2O70311 529 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gna11P21278 359 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Celf1P28659 486 aaKnown RBP8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Znf667Q2TL60 609 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm5592Q3V0A6 857 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ctr9Q62018 1173 aaKnown RBP8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Amigo3Q8C2S7 508 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Q8CEZ4 452 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tcp11l2Q8K1H7 517 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Pcdhgc5Q91XW9 944 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Smtnl1Q99LM3 459 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Syce1Q9D495 329 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Pdcd6ipQ9WU78 869 aaKnown RBP8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 4931408C20RikE9PWP9 1381 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm30191A0A0U1RNT7 187 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Usp53P15975 1069 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Cdr2P97817 455 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 TxlnaQ6PAM1 554 aaKnown RBP8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 E2f4Q8R0K9 410 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 BaatQ91X34 420 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Efhd1Q9D4J1 240 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 CenphQ9QYM8 241 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Col20a1Q923P0 1320 aa8.42□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ano3A2AHL1 981 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Hmgb1P63158 215 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Spata5Q3UMC0 893 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Armc2Q3URY6 854 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ccdc42Q5SV66 316 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 LrmpQ60664 539 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Q66JV7 365 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 HmcesQ8R1M0 353 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 McamQ8R2Y2 648 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Krt79Q8VED5 531 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 RtcbQ99LF4 505 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Sorbs3Q9R1Z8 733 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Sh3tc1G3X9F6 1346 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gli3Q61602 1583 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ankrd63A2ARS0 390 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Qtrt2B8ZXI1 415 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Nap1l1P28656 391 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Mmp14P53690 582 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tubb5P99024 444 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms