RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PHF20L1A8MW92 1017 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 USP17L12C9JPN9 530 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 USP17L21D6R901 530 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 FOXP2O15409 715 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 APPP05067 770 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 ASNSP08243 561 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 SLC10A3P09131 477 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 XRCC6P12956 609 aaKnown RBP eCLIP12.01□□□□□ -0.495e-6■■□□□ 11.5
PHGDH-224ENST00000641711 NOGQ13253 232 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 CTR9Q6PD62 1173 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 NECAB1Q8N987 351 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 CHMP4CQ96CF2 233 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 CCDC17Q96LX7 622 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
PHGDH-224ENST00000641711 DNAJC18Q9H819 358 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 SAP30BPQ9UHR5 308 aaKnown RBP12.01□□□□□ -0.49
PHGDH-224ENST00000641711 ANAPC4Q9UJX5 808 aa12.01□□□□□ -0.49
PHGDH-224ENST00000641711 SPDYE5A6NIY4 337 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 E7EWF7 191 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 PFKFB2O60825 505 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 CAP2P40123 477 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 EVCP57679 992 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 VGLL4Q14135 290 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
PHGDH-224ENST00000641711 FOXD4L5Q5VV16 416 aaPredicted RBP12□□□□□ -0.49
PHGDH-224ENST00000641711 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
PHGDH-224ENST00000641711 Q6ZUG5 572 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 ERO1BQ86YB8 467 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 FOXD4L4Q8WXT5 416 aaPredicted RBP12□□□□□ -0.49
PHGDH-224ENST00000641711 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 GRPEL1Q9HAV7 217 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 PICK1Q9NRD5 415 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
PHGDH-224ENST00000641711 UBE2Q2LH0YL09 131 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 FGAP02671 866 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 INPP5BP32019 993 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 MAP2K2P36507 400 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PLCD1P51178 756 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PPATQ06203 517 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PDE4BQ07343 736 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PPARAQ07869 468 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PPIL2Q13356 520 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PRKG1Q13976 671 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 GAS2L3Q86XJ1 694 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 CAPNS2Q96L46 248 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 SNCAIPQ9Y6H5 919 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 PLIN4Q96Q06 1357 aa11.99□□□□□ -0.49
PHGDH-224ENST00000641711 LOC285556D6RIA3 1793 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 SHMT1P34896 483 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 ZSCAN23Q3MJ62 389 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 SPRYD7Q5W111 196 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
PHGDH-224ENST00000641711 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
PHGDH-224ENST00000641711 SMARCC2Q8TAQ2 1214 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 ZNF274Q96GC6 653 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-224ENST00000641711 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 RNF41Q9H4P4 317 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-224ENST00000641711 AS3MTQ9HBK9 375 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 CABP5Q9NP86 173 aa11.98□□□□□ -0.49
PHGDH-224ENST00000641711 MANSC4A6NHS7 340 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-224ENST00000641711 FAM155AB1AL88 458 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-224ENST00000641711 ORC4O43929 436 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 FGRP09769 529 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 NCLP19338 710 aaKnown RBP11.97□□□□□ -0.49
PHGDH-224ENST00000641711 CDK8P49336 464 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 INHBEP58166 350 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-224ENST00000641711 TMEM179Q6ZVK1 233 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 MOB2Q70IA6 237 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 STAG1Q8WVM7 1258 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 BRF1Q92994 677 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 ZBTB21Q9ULJ3 1066 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 KCNH4Q9UQ05 1017 aa11.97□□□□□ -0.49
PHGDH-224ENST00000641711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
PHGDH-224ENST00000641711 MYH4Q9Y623 1939 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 MINDY4BA8MYZ0 360 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 CXCL11O14625 94 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 CYP2D6P10635 497 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 PTPRAP18433 802 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 HMGN5P82970 282 aaKnown RBP11.96□□□□□ -0.49
PHGDH-224ENST00000641711 SCRN1Q12765 414 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 SREBF2Q12772 1141 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 ABCB5Q2M3G0 1257 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-224ENST00000641711 MB21D2Q8IYB1 491 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-224ENST00000641711 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-224ENST00000641711 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 CLMNQ96JQ2 1002 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms