RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 DGKHQ86XP1 1220 aa13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 NKX2-3Q8TAU0 364 aa13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 TTC14Q96N46 770 aa13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 MYH8P13535 1937 aa13.92□□□□□ -0.18
KCNMA1-289ENST00000640807 RAD21O60216 631 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 TTLL1O95922 423 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 ANP32AP39687 249 aaKnown RBP13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 ENAHQ8N8S7 591 aaPredicted RBP13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 ARHGEF10LQ9HCE6 1279 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 SHROOM1Q2M3G4 852 aaPredicted RBP13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 FEZ1Q99689 392 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 USP17L5A8MUK1 530 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 AK2P54819 239 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 IGDCC4Q8TDY8 1250 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 SSC5DA1L4H1 1573 aa13.91□□□□□ -0.18
KCNMA1-289ENST00000640807 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 LIFRP42702 1097 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 MCM2P49736 904 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 VGLL4Q14135 290 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 SLC10A4Q96EP9 437 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 AS3MTQ9HBK9 375 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 FSTL1Q12841 308 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
KCNMA1-289ENST00000640807 TOP1P11387 765 aaKnown RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 JAG1P78504 1218 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 NYAP2Q9P242 653 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 PLIN4Q96Q06 1357 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 APOBRQ0VD83 1088 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 ELP3Q9H9T3 547 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 LY9Q9HBG7 655 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 KLF18A0A0U1RQI7 1052 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 HUNKP57058 714 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 SEC23AQ15436 765 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 NOL9Q5SY16 702 aaKnown RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
KCNMA1-289ENST00000640807 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 PTPRAP18433 802 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 GUCY1A2P33402 732 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 CST9Q5W186 159 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 PNMA1Q8ND90 353 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 RBM19Q9Y4C8 960 aaKnown RBP13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 UNCXA6NJT0 531 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 SPP2Q13103 211 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 BECN1Q14457 450 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 LDLRAD1Q5T700 205 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 RCSD1Q6JBY9 416 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 SGMS1Q86VZ5 419 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 FBXL16Q8N461 479 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 CHMP4CQ96CF2 233 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 ABT1Q9ULW3 272 aaKnown RBP13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 SNCAIPQ9Y6H5 919 aa13.88□□□□□ -0.19
KCNMA1-289ENST00000640807 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ERO1BQ86YB8 467 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ZNF280CQ8ND82 737 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ANKS1AQ92625 1134 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 GOLGA8BA8MQT2 603 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ZBTB43O43298 467 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ZYXQ15942 572 aaKnown RBP13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ZNF654Q8IZM8 581 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 ZSCAN31Q96LW9 406 aaPredicted RBP13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 AGXT2Q9BYV1 514 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
KCNMA1-289ENST00000640807 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
KCNMA1-289ENST00000640807 TRIM75PA6NK02 468 aa13.86□□□□□ -0.19
KCNMA1-289ENST00000640807 STK3Q13188 491 aa13.86□□□□□ -0.19
KCNMA1-289ENST00000640807 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
KCNMA1-289ENST00000640807 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
KCNMA1-289ENST00000640807 TMEM88BA6NKF7 163 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms