RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 CCDC178Q5BJE1 867 aa24.43■■□□□ 1.5
SCARB2-219ENST00000639738 APOA5Q6Q788 366 aa24.43■■□□□ 1.5
SCARB2-219ENST00000639738 SIAH1Q8IUQ4 282 aa24.43■■□□□ 1.5
SCARB2-219ENST00000639738 KRT26Q7Z3Y9 468 aa24.42■■□□□ 1.5
SCARB2-219ENST00000639738 SULF1Q8IWU6 871 aa24.42■■□□□ 1.5
SCARB2-219ENST00000639738 NECAB1Q8N987 351 aa24.42■■□□□ 1.5
SCARB2-219ENST00000639738 TRIM34Q9BYJ4 488 aa24.42■■□□□ 1.5
SCARB2-219ENST00000639738 NID2Q14112 1375 aa24.42■■□□□ 1.5
SCARB2-219ENST00000639738 MYH4Q9Y623 1939 aa24.42■■□□□ 1.5
SCARB2-219ENST00000639738 ERICH2A1L162 156 aa24.41■■□□□ 1.5
SCARB2-219ENST00000639738 GDF11O95390 407 aa24.41■■□□□ 1.5
SCARB2-219ENST00000639738 ABCB5Q2M3G0 1257 aa24.41■■□□□ 1.5
SCARB2-219ENST00000639738 USP48Q86UV5 1035 aa24.41■■□□□ 1.5
SCARB2-219ENST00000639738 CAP2P40123 477 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 IFIT1BQ5T764 474 aaKnown RBP24.4■■□□□ 1.5
SCARB2-219ENST00000639738 TMEM179Q6ZVK1 233 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 CLEC10AQ8IUN9 316 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 SMC1BQ8NDV3 1235 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 GTF3C6Q969F1 213 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 TMEM47Q9BQJ4 181 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 FAM217BQ9NTX9 383 aaPredicted RBP24.4■■□□□ 1.5
SCARB2-219ENST00000639738 SCRN1Q12765 414 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 TROAPQ12815 778 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 SEPT2Q15019 361 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 ZNF654Q8IZM8 581 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 HOOK2Q96ED9 719 aa24.4■■□□□ 1.5
SCARB2-219ENST00000639738 GLIS2Q9BZE0 524 aaPredicted RBP24.4■■□□□ 1.5
SCARB2-219ENST00000639738 GH2P01242 217 aa24.39■■□□□ 1.49
SCARB2-219ENST00000639738 RCAN1P53805 252 aa24.39■■□□□ 1.49
SCARB2-219ENST00000639738 SUPT20HL1Q3ZLR7 823 aa24.39■■□□□ 1.49
SCARB2-219ENST00000639738 MKL1Q969V6 931 aa24.39■■□□□ 1.49
SCARB2-219ENST00000639738 MYL10Q9BUA6 226 aa24.39■■□□□ 1.49
SCARB2-219ENST00000639738 CCDC69A6NI79 296 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 STK3Q13188 491 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 DCAF15Q66K64 600 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 CDC37L1Q7L3B6 337 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 CDCA5Q96FF9 252 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 INTS4Q96HW7 963 aaKnown RBP24.38■■□□□ 1.49
SCARB2-219ENST00000639738 ZNF341Q9BYN7 854 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 ZBTB21Q9ULJ3 1066 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 FZD1Q9UP38 647 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 SLC12A7Q9Y666 1083 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 DOCK1Q14185 1865 aa24.38■■□□□ 1.49
SCARB2-219ENST00000639738 MPHOSPH10O00566 681 aaKnown RBP24.37■■□□□ 1.49
SCARB2-219ENST00000639738 USP2O75604 605 aaPredicted RBP24.37■■□□□ 1.49
SCARB2-219ENST00000639738 NFXL1Q6ZNB6 911 aa24.37■■□□□ 1.49
SCARB2-219ENST00000639738 RAB11FIP4Q86YS3 637 aa24.37■■□□□ 1.49
SCARB2-219ENST00000639738 CCDC83Q8IWF9 413 aa24.37■■□□□ 1.49
SCARB2-219ENST00000639738 KLRG1Q96E93 195 aa24.37■■□□□ 1.49
SCARB2-219ENST00000639738 SLKQ9H2G2 1235 aaPredicted RBP24.37■■□□□ 1.49
SCARB2-219ENST00000639738 KANSL2Q9H9L4 492 aa24.37■■□□□ 1.49
SCARB2-219ENST00000639738 NCOA5Q9HCD5 579 aaKnown RBP24.37■■□□□ 1.49
SCARB2-219ENST00000639738 NYAP2Q9P242 653 aa24.37■■□□□ 1.49
SCARB2-219ENST00000639738 OTOFQ9HC10 1997 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 GOLGA8BA8MQT2 603 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 ZBTB43O43298 467 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 CTNND1O60716 968 aaKnown RBP24.36■■□□□ 1.49
SCARB2-219ENST00000639738 CTDNEP1O95476 244 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 TOP1P11387 765 aaKnown RBP24.36■■□□□ 1.49
SCARB2-219ENST00000639738 CCT2P78371 535 aaKnown RBP24.36■■□□□ 1.49
SCARB2-219ENST00000639738 DNAJC5GQ8N7S2 189 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 STX8Q9UNK0 236 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 PHIPQ8WWQ0 1821 aa24.36■■□□□ 1.49
SCARB2-219ENST00000639738 TTLL1O95922 423 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 RXRAP19793 462 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 CDC27P30260 824 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 INPP5BP32019 993 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 DDIT3P35638 169 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 MAP1SQ66K74 1059 aaPredicted RBP24.35■■□□□ 1.49
SCARB2-219ENST00000639738 LDHDQ86WU2 507 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 PNMA1Q8ND90 353 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 DDAH1O94760 285 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 EEF2P13639 858 aaKnown RBP24.35■■□□□ 1.49
SCARB2-219ENST00000639738 CABP5Q9NP86 173 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 GINM1Q9NU53 330 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.35■■□□□ 1.49
SCARB2-219ENST00000639738 CLIP2Q9UDT6 1046 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 CLEC11AQ9Y240 323 aa24.35■■□□□ 1.49
SCARB2-219ENST00000639738 NTRK3Q16288 839 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 CATIPQ7Z7H3 387 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 MICU3Q86XE3 530 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 FANCBQ8NB91 859 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 SPRYD3Q8NCJ5 442 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.34■■□□□ 1.49
SCARB2-219ENST00000639738 MAP3K14Q99558 947 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 KAT14Q9H8E8 782 aa24.34■■□□□ 1.49
SCARB2-219ENST00000639738 A0A1W2PRG0 241 aa24.33■■□□□ 1.49
SCARB2-219ENST00000639738 DTNBO60941 627 aa24.33■■□□□ 1.49
SCARB2-219ENST00000639738 ADD1P35611 737 aaKnown RBP24.33■■□□□ 1.49
SCARB2-219ENST00000639738 METAP2P50579 478 aaKnown RBP eCLIP24.33■■□□□ 1.49
SCARB2-219ENST00000639738 HTRA3P83110 453 aa24.33■■□□□ 1.49
SCARB2-219ENST00000639738 FOXD4L1Q9NU39 408 aa24.33■■□□□ 1.49
SCARB2-219ENST00000639738 ASNSP08243 561 aa24.32■■□□□ 1.48
SCARB2-219ENST00000639738 ICA1Q05084 483 aa24.32■■□□□ 1.48
SCARB2-219ENST00000639738 RAB3GAP1Q15042 981 aa24.32■■□□□ 1.48
SCARB2-219ENST00000639738 PPP4R3BQ5MIZ7 849 aa24.32■■□□□ 1.48
SCARB2-219ENST00000639738 NOL9Q5SY16 702 aaKnown RBP24.32■■□□□ 1.48
SCARB2-219ENST00000639738 NSUN7Q8NE18 718 aaKnown RBP24.32■■□□□ 1.48
SCARB2-219ENST00000639738 SMARCC2Q8TAQ2 1214 aa24.32■■□□□ 1.48
SCARB2-219ENST00000639738 NAP1L2Q9ULW6 460 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms