RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 SLC44A5Q8NCS7 719 aa13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 LOC285556D6RIA3 1793 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 GRB14Q14449 540 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 PHIPQ8WWQ0 1821 aa13.69□□□□□ -0.22
PTP4A1-207ENST00000639568 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 ERC2O15083 957 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 TIMP1P01033 207 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 RNF180Q86T96 592 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 PI4KBQ9UBF8 816 aa13.68□□□□□ -0.22
PTP4A1-207ENST00000639568 GPR75-ASB3A0A0A6YYF3 556 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 EYA2O00167 538 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 APBB1O00213 710 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 RHBDL3P58872 404 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 ATP2B3Q16720 1220 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 MFSD5Q6N075 450 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 XPNPEP3Q9NQH7 507 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
PTP4A1-207ENST00000639568 VAMP4O75379 141 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 CNMDO75829 334 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 RARBP10826 455 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 ADORA2AP29274 412 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 FAAP100Q0VG06 881 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 TMEM240Q5SV17 173 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 CRACR2BQ8N4Y2 399 aaPredicted RBP13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 TMEM199Q8N511 208 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 FEZ1Q99689 392 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 C11orf16Q9NQ32 467 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 GINM1Q9NU53 330 aa13.66□□□□□ -0.22
PTP4A1-207ENST00000639568 A0A1W2PQ45 241 aaPredicted RBP13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 A0A1W2PQY0 241 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 STRNO43815 780 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 LDHCP07864 332 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 PHKA1P46020 1223 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 GSTO1P78417 241 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 MECOMQ03112 1051 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 DHX36Q9H2U1 1008 aaKnown RBP13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 CEP126Q9P2H0 1117 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 COG5Q9UP83 839 aa13.65□□□□□ -0.22
PTP4A1-207ENST00000639568 PRR33A8MZF0 331 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 GTPBP6O43824 516 aaPredicted RBP13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 GDF11O95390 407 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 IGHA2P01877 340 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 ZYXQ15942 572 aaKnown RBP13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 C16orf59Q7L2K0 433 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 NUP133Q8WUM0 1156 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 STARD7Q9NQZ5 370 aa13.64□□□□□ -0.23
PTP4A1-207ENST00000639568 RLFQ13129 1914 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 FRMPD3Q5JV73 1810 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 PI4K2BG5E9Z4 385 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 TLL1O43897 1013 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 PGK1P00558 417 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 ACRP10323 421 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 CSF2RAP15509 400 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 JAG1P78504 1218 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 IL16Q14005 1332 aa13.63□□□□□ -0.23
PTP4A1-207ENST00000639568 USP14P54578 494 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 NHLH1Q02575 133 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 RASGRF1Q13972 1273 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms