RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 FMNL1O95466 1100 aaPredicted RBP23.23■■□□□ 1.31
PMS1-222ENST00000639501 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
PMS1-222ENST00000639501 CTR9Q6PD62 1173 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 GBP3Q9H0R5 595 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 MED4Q9NPJ6 270 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 MYO6Q9UM54 1294 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 JRKLQ9Y4A0 524 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 ZC3H4Q9UPT8 1303 aaKnown RBP23.22■■□□□ 1.31
PMS1-222ENST00000639501 ADD2P35612 726 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 SKIDA1Q1XH10 827 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 WDR93Q6P2C0 686 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 CNGA4Q8IV77 575 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 EPSTI1Q96J88 318 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 SRPRBQ9Y5M8 271 aaKnown RBP23.22■■□□□ 1.31
PMS1-222ENST00000639501 AKAP11Q9UKA4 1901 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 STK36Q9NRP7 1315 aa23.22■■□□□ 1.31
PMS1-222ENST00000639501 FAM205CA6NFA0 338 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 AKAP17AQ02040 695 aaKnown RBP23.21■■□□□ 1.31
PMS1-222ENST00000639501 SGMS1Q86VZ5 419 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 GDAP1L1Q96MZ0 367 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 ABHD10Q9NUJ1 306 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 HDAC6Q9UBN7 1215 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 TOM1O60784 492 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.21■■□□□ 1.31
PMS1-222ENST00000639501 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 TMEM87BQ96K49 555 aa23.21■■□□□ 1.31
PMS1-222ENST00000639501 TATP17735 454 aaPredicted RBP23.2■■□□□ 1.3
PMS1-222ENST00000639501 TFR2Q9UP52 801 aa23.2■■□□□ 1.3
PMS1-222ENST00000639501 REXO2Q9Y3B8 237 aaKnown RBP23.2■■□□□ 1.3
PMS1-222ENST00000639501 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
PMS1-222ENST00000639501 ENC1O14682 589 aa23.2■■□□□ 1.3
PMS1-222ENST00000639501 RILPL1Q5EBL4 403 aa23.2■■□□□ 1.3
PMS1-222ENST00000639501 ZNF579Q8NAF0 562 aaKnown RBP23.2■■□□□ 1.3
PMS1-222ENST00000639501 AFAP1L1Q8TED9 768 aa23.2■■□□□ 1.3
PMS1-222ENST00000639501 SLC12A7Q9Y666 1083 aa23.2■■□□□ 1.3
PMS1-222ENST00000639501 PARP4Q9UKK3 1724 aaKnown RBP23.2■■□□□ 1.3
PMS1-222ENST00000639501 AARSP49588 968 aaKnown RBP eCLIP23.19■■□□□ 1.3
PMS1-222ENST00000639501 CCDC57Q2TAC2 916 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 GSPT2Q8IYD1 628 aaKnown RBP23.19■■□□□ 1.3
PMS1-222ENST00000639501 PIH1D3Q9NQM4 214 aaKnown RBP23.19■■□□□ 1.3
PMS1-222ENST00000639501 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 HPCAL4Q9UM19 191 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 PPFIA4O75335 1185 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 A1BGP04217 495 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 TUBB4BP68371 445 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 CTDSPL2Q05D32 466 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 ZSWIM5Q9P217 1185 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 CTNND2Q9UQB3 1225 aa23.19■■□□□ 1.3
PMS1-222ENST00000639501 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
PMS1-222ENST00000639501 IFNAR1P17181 557 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 KRT31Q15323 416 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 SAFBQ15424 915 aaKnown RBP eCLIP23.18■■□□□ 1.3
PMS1-222ENST00000639501 STAMQ92783 540 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 PAGE5Q96GU1 130 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 CHP1Q99653 195 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 ABCA3Q99758 1704 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 IFIT3O14879 490 aaKnown RBP23.18■■□□□ 1.3
PMS1-222ENST00000639501 ZMYND10O75800 440 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 COL18A1P39060 1754 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 RIC1Q4ADV7 1423 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 KANK3Q6NY19 840 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 ITIH6Q6UXX5 1313 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 TMTC1Q8IUR5 882 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 PPM1EQ8WY54 764 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 SHISA4Q96DD7 197 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 CABP5Q9NP86 173 aa23.18■■□□□ 1.3
PMS1-222ENST00000639501 SRGAP2O75044 1071 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 USP14P54578 494 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 TRAPPC11Q7Z392 1133 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 CCDC51Q96ER9 411 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 DCAF5Q96JK2 942 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 MMS19Q96T76 1030 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 ZKSCAN3Q9BRR0 538 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 VPS16Q9H269 839 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 FOXP1Q9H334 677 aaPredicted RBP23.17■■□□□ 1.3
PMS1-222ENST00000639501 TOMM22Q9NS69 142 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 GUCA1BQ9UMX6 200 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 LRP6O75581 1613 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 BCL9LQ86UU0 1499 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 ATRNO75882 1429 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 IDH1O75874 414 aaKnown RBP23.17■■□□□ 1.3
PMS1-222ENST00000639501 FILIP1LQ4L180 1135 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 DRC1Q96MC2 740 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 CTAGE1Q96RT6 745 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 ACBD3Q9H3P7 528 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 EPB41L4AQ9HCS5 686 aaPredicted RBP23.17■■□□□ 1.3
PMS1-222ENST00000639501 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
PMS1-222ENST00000639501 ZNF532Q9HCE3 1301 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 WNT7AO00755 349 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 MYBL2P10244 700 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 SH3RF1Q7Z6J0 888 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 CCDC148Q8NFR7 591 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.16■■□□□ 1.3
PMS1-222ENST00000639501 CDHR2Q9BYE9 1310 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 CABP4P57796 275 aa23.16■■□□□ 1.3
PMS1-222ENST00000639501 EARS2Q5JPH6 523 aaKnown RBP23.16■■□□□ 1.3
PMS1-222ENST00000639501 NUP88Q99567 741 aaPredicted RBP23.16■■□□□ 1.3
PMS1-222ENST00000639501 VIPAS39Q9H9C1 493 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms