RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
SCARB2-213ENST00000638680 RAD51AP2Q09MP3 1159 aa20.52■□□□□ 0.87
SCARB2-213ENST00000638680 MGARPQ8TDB4 240 aa20.52■□□□□ 0.87
SCARB2-213ENST00000638680 UIMC1Q96RL1 719 aa20.52■□□□□ 0.87
SCARB2-213ENST00000638680 NLRC4Q9NPP4 1024 aa20.52■□□□□ 0.87
SCARB2-213ENST00000638680 SMTNP53814 917 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 CCDC84Q86UT8 332 aaPredicted RBP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 VCX3BQ9H321 246 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 ZNF532Q9HCE3 1301 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 NCBP1Q09161 790 aaKnown RBP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 RPUSD2Q8IZ73 545 aaKnown RBP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 KIFC2Q96AC6 838 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 ABCC4O15439 1325 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 CFAP43Q8NDM7 1665 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 SEPT14Q6ZU15 432 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 YTHDC2Q9H6S0 1430 aaKnown RBP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 PZPP20742 1482 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 INSRP06213 1382 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 CALCRLQ16602 461 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 MRFAP1L1Q96HT8 127 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 USTQ9Y2C2 406 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 CTNNA1P35221 906 aaKnown RBP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 ADCY7P51828 1080 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 DDB1Q16531 1140 aa20.51■□□□□ 0.87
SCARB2-213ENST00000638680 AATFQ9NY61 560 aaKnown RBP eCLIP20.51■□□□□ 0.87
SCARB2-213ENST00000638680 TRAPPC8Q9Y2L5 1435 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 WDR7Q9Y4E6 1490 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 GOLGA8KD6RF30 607 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 MORC3Q14149 939 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 GCKRQ14397 625 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 PPP2R5BQ15173 497 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 LONRF2Q1L5Z9 754 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 MAEAQ7L5Y9 396 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 FAM170AA1A519 330 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 TAF5LO75529 589 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 HIBADHP31937 336 aaKnown RBP20.5■□□□□ 0.87
SCARB2-213ENST00000638680 ETF1P62495 437 aaKnown RBP20.5■□□□□ 0.87
SCARB2-213ENST00000638680 ITIH3Q06033 890 aa20.5■□□□□ 0.87
SCARB2-213ENST00000638680 TRPM2O94759 1503 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 KRT15P19012 456 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 TRIM58Q8NG06 486 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 OR8K1Q8NGG5 319 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 STK38LQ9Y2H1 464 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 A0A0D9SFI3 127 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 ATP5JP18859 108 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 MAP2K2P36507 400 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
SCARB2-213ENST00000638680 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 SBNO1A3KN83 1393 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 SDCCAG8Q86SQ7 713 aaPredicted RBP20.49■□□□□ 0.87
SCARB2-213ENST00000638680 ANKRD42Q8N9B4 389 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 LSM14BQ9BX40 385 aaKnown RBP20.49■□□□□ 0.87
SCARB2-213ENST00000638680 MYO1AQ9UBC5 1043 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 ARHGEF35A5YM69 484 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 PDE8AO60658 829 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 ATP1A2P50993 1020 aa20.49■□□□□ 0.87
SCARB2-213ENST00000638680 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.48■□□□□ 0.87
SCARB2-213ENST00000638680 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 NUCKS1Q9H1E3 243 aaKnown RBP20.48■□□□□ 0.87
SCARB2-213ENST00000638680 GMNNO75496 209 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 SNX16P57768 344 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 GEN1Q17RS7 908 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 FANCLQ9NW38 375 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 RGS12O14924 1447 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 GCNT3O95395 438 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 MYCT1Q8N699 235 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 RAB17Q9H0T7 212 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 DNM3Q9UQ16 869 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 CAPS2Q9BXY5 557 aa20.48■□□□□ 0.87
SCARB2-213ENST00000638680 ARID4AP29374 1257 aaPredicted RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 SARNPP82979 210 aaKnown RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 ZNF827Q17R98 1081 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 ARHGAP24Q8N264 748 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 EXOC7Q9UPT5 735 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 ZMYM3Q14202 1370 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 RGS16O15492 202 aaPredicted RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 PFKFB2O60825 505 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 RNF10Q8N5U6 811 aaKnown RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 HYOU1Q9Y4L1 999 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 IBTKQ9P2D0 1353 aaPredicted RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 CLGNO14967 610 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 CCDC38Q502W7 563 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 IQCDQ96DY2 449 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 MRPL44Q9H9J2 332 aaKnown RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 PCDHA7Q9UN72 937 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 NRBP1Q9UHY1 535 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 TACO1Q9BSH4 297 aaKnown RBP20.47■□□□□ 0.87
SCARB2-213ENST00000638680 VCXQ9H320 206 aa20.47■□□□□ 0.87
SCARB2-213ENST00000638680 EXOC3O60645 756 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 GAS8O95995 478 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 NDUFA8P51970 172 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 NOSTRINQ8IVI9 506 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
SCARB2-213ENST00000638680 LPIN2Q92539 896 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 PPP1R13BQ96KQ4 1090 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 B4DLN1 442 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms