RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 HERVK_113P62684 666 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 IRX3P78415 501 aaPredicted RBP17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 HDAC1Q13547 482 aaPredicted RBP17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 ZSCAN25Q6NSZ9 544 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 USP17L2Q6R6M4 530 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 RAET1EQ8TD07 263 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 APPBP2Q92624 585 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 KIAA1683Q9H0B3 1180 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 EPB41L4AQ9HCS5 686 aaPredicted RBP17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 PARP14Q460N5 1801 aa17.8■□□□□ 0.44
KCNMA1-229ENST00000638249 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 AKR1B1P15121 316 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 VCAM1P19320 739 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 MX1P20591 662 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 HOXD10P28358 340 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 CTR9Q6PD62 1173 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 NBPF11Q86T75 865 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 FEZ1Q99689 392 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 GSG1L2A8MUP6 293 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 MPHOSPH10O00566 681 aaKnown RBP17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 ELNP15502 786 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 KIAA1755Q5JYT7 1200 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 C16orf86Q6ZW13 317 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 SIAH1Q8IUQ4 282 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 SHISA4Q96DD7 197 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 CABP5Q9NP86 173 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 RBPJLQ9UBG7 517 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
KCNMA1-229ENST00000638249 GPAA1O43292 621 aa17.78■□□□□ 0.44
KCNMA1-229ENST00000638249 GLRX3O76003 335 aaKnown RBP17.78■□□□□ 0.44
KCNMA1-229ENST00000638249 CDK8P49336 464 aa17.78■□□□□ 0.44
KCNMA1-229ENST00000638249 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
KCNMA1-229ENST00000638249 ADCY3O60266 1144 aa17.77■□□□□ 0.43
KCNMA1-229ENST00000638249 CNMDO75829 334 aa17.77■□□□□ 0.43
KCNMA1-229ENST00000638249 Q3C1V9 767 aa17.77■□□□□ 0.43
KCNMA1-229ENST00000638249 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.43
KCNMA1-229ENST00000638249 TMEM106CQ9BVX2 250 aa17.77■□□□□ 0.43
KCNMA1-229ENST00000638249 GJD2Q9UKL4 321 aa17.77■□□□□ 0.43
KCNMA1-229ENST00000638249 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 ERC2O15083 957 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 USP14P54578 494 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 IRF5Q13568 498 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 CATSPERGQ6ZRH7 1159 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 TMEM179Q6ZVK1 233 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 GCC1Q96CN9 775 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 PAGR1Q9BTK6 254 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 PORCNQ9H237 461 aa17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 ARPP21Q9UBL0 812 aaPredicted RBP17.76■□□□□ 0.43
KCNMA1-229ENST00000638249 INHAP05111 366 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 ZFYP08048 801 aaPredicted RBP17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 CCL5P13501 91 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 ERVK-9P63128 1117 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 ERVK-24P63145 666 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 COA7Q96BR5 231 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 FSD1Q9BTV5 496 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 UNC93B1Q9H1C4 597 aa17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
KCNMA1-229ENST00000638249 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L15C9J2P7 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L13C9JLJ4 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L11C9JVI0 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L18D6R9N7 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L22D6RA61 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L17D6RBQ6 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L19D6RCP7 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L20D6RJB6 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 FOXP2O15409 715 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 IGHDP01880 384 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 PDE1AP54750 535 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 ICA1Q05084 483 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 USP17L24Q0WX57 530 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 SBK1Q52WX2 424 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 STAP2Q9UGK3 403 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
KCNMA1-229ENST00000638249 TRIM32Q13049 653 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 ZMYM1Q5SVZ6 1142 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 SMC5Q8IY18 1101 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 PXYLP1Q8TE99 480 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 DDRGK1Q96HY6 314 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 LNPKQ9C0E8 428 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 BTBD7Q9P203 1132 aa17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 BIN2Q9UBW5 565 aaPredicted RBP17.73■□□□□ 0.43
KCNMA1-229ENST00000638249 RASA1P20936 1047 aa17.72■□□□□ 0.43
KCNMA1-229ENST00000638249 GIMAP6Q6P9H5 292 aa17.72■□□□□ 0.43
KCNMA1-229ENST00000638249 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
KCNMA1-229ENST00000638249 AMOTL1Q8IY63 956 aa17.72■□□□□ 0.43
KCNMA1-229ENST00000638249 CCDC17Q96LX7 622 aa17.72■□□□□ 0.43
KCNMA1-229ENST00000638249 TMX2Q9Y320 296 aa17.72■□□□□ 0.43
KCNMA1-229ENST00000638249 COL11A1P12107 1806 aaPredicted RBP17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 MINDY4BA8MYZ0 360 aa17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 UBXN2AP68543 259 aa17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 GPR142Q7Z601 462 aa17.71■□□□□ 0.43
KCNMA1-229ENST00000638249 SPICE1Q8N0Z3 855 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms