RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 A0A1W2PRG0 241 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 ELNP15502 786 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 GRK4P32298 578 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 GCLCP48506 637 aaPredicted RBP21.33■■□□□ 1.01
PNKP-230ENST00000638016 HERVK_113P62684 666 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 C12orf60Q5U649 245 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 CTR9Q6PD62 1173 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 STK11IPQ8N1F8 1099 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 SEC62Q99442 399 aaKnown RBP21.33■■□□□ 1.01
PNKP-230ENST00000638016 CABP5Q9NP86 173 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 PLXNB2O15031 1838 aa21.33■■□□□ 1.01
PNKP-230ENST00000638016 TTC41PQ6P2S7 1318 aa21.32■■□□□ 1
PNKP-230ENST00000638016 RNF113AO15541 343 aaKnown RBP21.32■■□□□ 1
PNKP-230ENST00000638016 MX1P20591 662 aa21.32■■□□□ 1
PNKP-230ENST00000638016 EXOC6Q8TAG9 804 aa21.32■■□□□ 1
PNKP-230ENST00000638016 APPBP2Q92624 585 aa21.32■■□□□ 1
PNKP-230ENST00000638016 TMEM106CQ9BVX2 250 aa21.32■■□□□ 1
PNKP-230ENST00000638016 EPB41L4AQ9HCS5 686 aaPredicted RBP21.32■■□□□ 1
PNKP-230ENST00000638016 TAOK2Q9UL54 1235 aa21.32■■□□□ 1
PNKP-230ENST00000638016 GSG1L2A8MUP6 293 aa21.31■■□□□ 1
PNKP-230ENST00000638016 VCAM1P19320 739 aa21.31■■□□□ 1
PNKP-230ENST00000638016 CDK8P49336 464 aa21.31■■□□□ 1
PNKP-230ENST00000638016 HDAC1Q13547 482 aaPredicted RBP21.31■■□□□ 1
PNKP-230ENST00000638016 KIAA1755Q5JYT7 1200 aa21.31■■□□□ 1
PNKP-230ENST00000638016 C12orf42Q96LP6 360 aa21.31■■□□□ 1
PNKP-230ENST00000638016 PAGR1Q9BTK6 254 aa21.31■■□□□ 1
PNKP-230ENST00000638016 KIAA1683Q9H0B3 1180 aa21.31■■□□□ 1
PNKP-230ENST00000638016 RBPJLQ9UBG7 517 aa21.31■■□□□ 1
PNKP-230ENST00000638016 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
PNKP-230ENST00000638016 GPAA1O43292 621 aa21.3■■□□□ 1
PNKP-230ENST00000638016 Q3C1V9 767 aa21.3■■□□□ 1
PNKP-230ENST00000638016 SWAP70Q9UH65 585 aa21.3■■□□□ 1
PNKP-230ENST00000638016 ERC2O15083 957 aa21.29■■□□□ 1
PNKP-230ENST00000638016 ADCY3O60266 1144 aa21.29■■□□□ 1
PNKP-230ENST00000638016 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
PNKP-230ENST00000638016 C16orf86Q6ZW13 317 aa21.29■■□□□ 1
PNKP-230ENST00000638016 SIAH1Q8IUQ4 282 aa21.29■■□□□ 1
PNKP-230ENST00000638016 SHISA4Q96DD7 197 aa21.29■■□□□ 1
PNKP-230ENST00000638016 FSD1Q9BTV5 496 aa21.29■■□□□ 1
PNKP-230ENST00000638016 BIN2Q9UBW5 565 aaPredicted RBP21.29■■□□□ 1
PNKP-230ENST00000638016 CNMDO75829 334 aa21.28■■□□□ 1
PNKP-230ENST00000638016 TMEM179Q6ZVK1 233 aa21.28■■□□□ 1
PNKP-230ENST00000638016 COA7Q96BR5 231 aa21.28■■□□□ 1
PNKP-230ENST00000638016 PORCNQ9H237 461 aa21.28■■□□□ 1
PNKP-230ENST00000638016 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
PNKP-230ENST00000638016 USP17L15C9J2P7 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L13C9JLJ4 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L11C9JVI0 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L18D6R9N7 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L22D6RA61 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L17D6RBQ6 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L19D6RCP7 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L20D6RJB6 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 IGHDP01880 384 aa21.27■■□□□ 1
PNKP-230ENST00000638016 INHAP05111 366 aa21.27■■□□□ 1
PNKP-230ENST00000638016 CCL5P13501 91 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP14P54578 494 aa21.27■■□□□ 1
PNKP-230ENST00000638016 USP17L24Q0WX57 530 aa21.27■■□□□ 1
PNKP-230ENST00000638016 CATSPERGQ6ZRH7 1159 aa21.27■■□□□ 1
PNKP-230ENST00000638016 SLAIN1Q8ND83 568 aa21.27■■□□□ 1
PNKP-230ENST00000638016 GCC1Q96CN9 775 aa21.27■■□□□ 1
PNKP-230ENST00000638016 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
PNKP-230ENST00000638016 LNPKQ9C0E8 428 aa21.27■■□□□ 1
PNKP-230ENST00000638016 UNC93B1Q9H1C4 597 aa21.27■■□□□ 1
PNKP-230ENST00000638016 GJD2Q9UKL4 321 aa21.27■■□□□ 1
PNKP-230ENST00000638016 RLFQ13129 1914 aa21.27■■□□□ 1
PNKP-230ENST00000638016 GREB1LQ9C091 1923 aaPredicted RBP21.26■□□□□ 0.99
PNKP-230ENST00000638016 ZFYP08048 801 aaPredicted RBP21.26■□□□□ 0.99
PNKP-230ENST00000638016 ERVK-9P63128 1117 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 ERVK-24P63145 666 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 ICA1Q05084 483 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 IRF5Q13568 498 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 CCDC129Q6ZRS4 1044 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 AMOTL1Q8IY63 956 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 GPRC5AQ8NFJ5 357 aa21.26■□□□□ 0.99
PNKP-230ENST00000638016 ARPP21Q9UBL0 812 aaPredicted RBP21.26■□□□□ 0.99
PNKP-230ENST00000638016 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
PNKP-230ENST00000638016 MINDY4BA8MYZ0 360 aa21.25■□□□□ 0.99
PNKP-230ENST00000638016 PDE1AP54750 535 aa21.25■□□□□ 0.99
PNKP-230ENST00000638016 TRIM32Q13049 653 aa21.25■□□□□ 0.99
PNKP-230ENST00000638016 SPICE1Q8N0Z3 855 aa21.25■□□□□ 0.99
PNKP-230ENST00000638016 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.25■□□□□ 0.99
PNKP-230ENST00000638016 RNF208Q9H0X6 261 aa21.25■□□□□ 0.99
PNKP-230ENST00000638016 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
PNKP-230ENST00000638016 SBK1Q52WX2 424 aa21.24■□□□□ 0.99
PNKP-230ENST00000638016 ZMYM1Q5SVZ6 1142 aa21.24■□□□□ 0.99
PNKP-230ENST00000638016 BTBD7Q9P203 1132 aa21.24■□□□□ 0.99
PNKP-230ENST00000638016 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
PNKP-230ENST00000638016 PARP14Q460N5 1801 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 APPP05067 770 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 CYP2B6P20813 491 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 RASA1P20936 1047 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 TDO2P48775 406 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 UBXN2AP68543 259 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 IRX6P78412 446 aaPredicted RBP21.23■□□□□ 0.99
PNKP-230ENST00000638016 ATP2B2Q01814 1243 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 PXYLP1Q8TE99 480 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 STAP2Q9UGK3 403 aa21.23■□□□□ 0.99
PNKP-230ENST00000638016 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms