RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
LIN28B-202ENST00000635857 PDE4BQ07343 736 aa20.29■□□□□ 0.84
LIN28B-202ENST00000635857 SEPT2Q15019 361 aa20.29■□□□□ 0.84
LIN28B-202ENST00000635857 USP17L2Q6R6M4 530 aa20.29■□□□□ 0.84
LIN28B-202ENST00000635857 STK11IPQ8N1F8 1099 aa20.29■□□□□ 0.84
LIN28B-202ENST00000635857 ARHGEF10LQ9HCE6 1279 aa20.29■□□□□ 0.84
LIN28B-202ENST00000635857 CCDC171Q6TFL3 1326 aa20.28■□□□□ 0.84
LIN28B-202ENST00000635857 ZYXQ15942 572 aaKnown RBP20.28■□□□□ 0.84
LIN28B-202ENST00000635857 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
LIN28B-202ENST00000635857 CWC27Q6UX04 472 aaKnown RBP20.28■□□□□ 0.84
LIN28B-202ENST00000635857 CYP2C8P10632 490 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 AKR1B1P15121 316 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 ICA1Q05084 483 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 PPARAQ07869 468 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 TREML2Q5T2D2 321 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 ZNF444Q8N0Y2 327 aaPredicted RBP20.27■□□□□ 0.84
LIN28B-202ENST00000635857 CD99L2Q8TCZ2 262 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 MCOLN1Q9GZU1 580 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 CPA4Q9UI42 421 aa20.27■□□□□ 0.84
LIN28B-202ENST00000635857 RUFY2Q8WXA3 655 aa20.26■□□□□ 0.83
LIN28B-202ENST00000635857 KIAA1683Q9H0B3 1180 aa20.26■□□□□ 0.83
LIN28B-202ENST00000635857 TRIM17Q9Y577 477 aa20.26■□□□□ 0.83
LIN28B-202ENST00000635857 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
LIN28B-202ENST00000635857 ATP2B2Q01814 1243 aa20.25■□□□□ 0.83
LIN28B-202ENST00000635857 KANSL2Q9H9L4 492 aa20.25■□□□□ 0.83
LIN28B-202ENST00000635857 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
LIN28B-202ENST00000635857 SMIM22K7EJ46 135 aa20.24■□□□□ 0.83
LIN28B-202ENST00000635857 HSPD1P10809 573 aaKnown RBP20.24■□□□□ 0.83
LIN28B-202ENST00000635857 GUCY1A2P33402 732 aa20.24■□□□□ 0.83
LIN28B-202ENST00000635857 GCLCP48506 637 aaPredicted RBP20.24■□□□□ 0.83
LIN28B-202ENST00000635857 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
LIN28B-202ENST00000635857 C17orf99Q6UX52 265 aa20.24■□□□□ 0.83
LIN28B-202ENST00000635857 ZNF589Q86UQ0 364 aaPredicted RBP20.24■□□□□ 0.83
LIN28B-202ENST00000635857 PRDM1O75626 825 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 TSPY3P0CV98 308 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 TSPY8P0CW00 308 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 RASA1P20936 1047 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 LACTBP83111 547 aaPredicted RBP20.23■□□□□ 0.83
LIN28B-202ENST00000635857 ALX1Q15699 326 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 ACER1Q8TDN7 264 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 GTF3C2Q8WUA4 911 aaPredicted RBP20.23■□□□□ 0.83
LIN28B-202ENST00000635857 C12orf42Q96LP6 360 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 ASCC2Q9H1I8 757 aaPredicted RBP20.23■□□□□ 0.83
LIN28B-202ENST00000635857 EMILIN3Q9NT22 766 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 ZMYM6O95789 1325 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 RAD50Q92878 1312 aa20.23■□□□□ 0.83
LIN28B-202ENST00000635857 GNRH1P01148 92 aa20.22■□□□□ 0.83
LIN28B-202ENST00000635857 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
LIN28B-202ENST00000635857 ABHD8Q96I13 439 aa20.22■□□□□ 0.83
LIN28B-202ENST00000635857 TOMM22Q9NS69 142 aa20.22■□□□□ 0.83
LIN28B-202ENST00000635857 ADGRA2Q96PE1 1338 aa20.22■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L15C9J2P7 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L13C9JLJ4 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L11C9JVI0 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L18D6R9N7 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L22D6RA61 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L17D6RBQ6 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L19D6RCP7 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L20D6RJB6 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 RAD21O60216 631 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 FMNL1O95466 1100 aaPredicted RBP20.21■□□□□ 0.83
LIN28B-202ENST00000635857 USP17L24Q0WX57 530 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 FBXO46Q6PJ61 603 aaPredicted RBP20.21■□□□□ 0.83
LIN28B-202ENST00000635857 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 LPAR1Q92633 364 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 GOPCQ9HD26 462 aa20.21■□□□□ 0.83
LIN28B-202ENST00000635857 TSPY2A6NKD2 308 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 ECM2O94769 699 aaPredicted RBP20.2■□□□□ 0.82
LIN28B-202ENST00000635857 FGAP02671 866 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 BCRP11274 1271 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 VCAM1P19320 739 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 HOXD10P28358 340 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 FCGRTP55899 365 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 CTDSPL2Q05D32 466 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 FAM110CQ1W6H9 321 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 TANGO6Q9C0B7 1094 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 ANAPC4Q9UJX5 808 aa20.2■□□□□ 0.82
LIN28B-202ENST00000635857 FOXP2O15409 715 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 EEF2P13639 858 aaKnown RBP20.19■□□□□ 0.82
LIN28B-202ENST00000635857 PSMC4P43686 418 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 HERVK_113P62684 666 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 CLEC10AQ8IUN9 316 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 RPAP3Q9H6T3 665 aaPredicted RBP20.19■□□□□ 0.82
LIN28B-202ENST00000635857 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 TMX2Q9Y320 296 aa20.19■□□□□ 0.82
LIN28B-202ENST00000635857 GREB1LQ9C091 1923 aaPredicted RBP20.19■□□□□ 0.82
LIN28B-202ENST00000635857 A0A1W2PRG0 241 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 ZNF213O14771 459 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 CAPN15O75808 1086 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 PRMT2P55345 433 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
LIN28B-202ENST00000635857 DSCC1Q9BVC3 393 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
LIN28B-202ENST00000635857 VCPKMTQ9H867 229 aa20.18■□□□□ 0.82
LIN28B-202ENST00000635857 RANBP6O60518 1105 aaKnown RBP20.17■□□□□ 0.82
LIN28B-202ENST00000635857 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms