RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 GMIPQ9P107 970 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 CAPN6Q9Y6Q1 641 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 PITPNM2Q9BZ72 1349 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 F6X3S4 739 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 CBX7O95931 251 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 TAL1P17542 331 aaPredicted RBP5.61□□□□□ -1.51
SRP54-214ENST00000630962 RNF4P78317 190 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 FANCCQ00597 558 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 COL9A2Q14055 689 aaPredicted RBP5.61□□□□□ -1.51
SRP54-214ENST00000630962 CDH24Q86UP0 819 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 USP48Q86UV5 1035 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 PHACTR4Q8IZ21 702 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 RNF141Q8WVD5 230 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 NKD1Q969G9 470 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.61□□□□□ -1.51
SRP54-214ENST00000630962 COPRSQ9NQ92 184 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 GPATCH2Q9NW75 528 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
SRP54-214ENST00000630962 GBP1P32455 592 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 TXKP42681 527 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 BNIP3Q12983 259 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 ZNF792Q3KQV3 632 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 SPRED2Q7Z698 418 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 ATG4DQ86TL0 474 aaPredicted RBP5.6□□□□□ -1.51
SRP54-214ENST00000630962 SLITRK4Q8IW52 837 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 ZNF654Q8IZM8 581 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 DNAJB8Q8NHS0 232 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 SYTL4Q96C24 671 aaPredicted RBP5.6□□□□□ -1.51
SRP54-214ENST00000630962 BRMS1Q9HCU9 246 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 ADAMTS1Q9UHI8 967 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 POLR3KQ9Y2Y1 108 aaPredicted RBP5.6□□□□□ -1.51
SRP54-214ENST00000630962 PCDHB14Q9Y5E9 798 aa5.6□□□□□ -1.51
SRP54-214ENST00000630962 RGS13O14921 159 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 TLR3O15455 904 aaKnown RBP5.59□□□□□ -1.51
SRP54-214ENST00000630962 GRIN3BO60391 1043 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 RAG1P15918 1043 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 MCM4P33991 863 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 ZP2Q05996 745 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 CDCP2Q5VXM1 449 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 NFXL1Q6ZNB6 911 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 RIN3Q8TB24 985 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 HSPA12BQ96MM6 686 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 DPH2Q9BQC3 489 aaPredicted RBP5.59□□□□□ -1.51
SRP54-214ENST00000630962 ASCC2Q9H1I8 757 aaPredicted RBP5.59□□□□□ -1.51
SRP54-214ENST00000630962 KLHL3Q9UH77 587 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 ST14Q9Y5Y6 855 aa5.59□□□□□ -1.51
SRP54-214ENST00000630962 SLC22A31A6NKX4 558 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 SEZ6Q53EL9 994 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 LDLRAD1Q5T700 205 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 CDKAL1Q5VV42 579 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 FBXO27Q8NI29 283 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 ENOX1Q8TC92 643 aaKnown RBP5.58□□□□□ -1.52
SRP54-214ENST00000630962 MRRFQ96E11 262 aaKnown RBP5.58□□□□□ -1.52
SRP54-214ENST00000630962 GPR62Q9BZJ7 368 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 RC3H2Q9HBD1 1191 aaKnown RBP5.58□□□□□ -1.52
SRP54-214ENST00000630962 SEMA3GQ9NS98 782 aa5.58□□□□□ -1.52
SRP54-214ENST00000630962 UPK3BL1B0FP48 263 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 UPK3BL2E5RIL1 263 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 ITGB5P18084 799 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 AFMP43652 599 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 TNK2Q07912 1038 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 INTS3Q68E01 1043 aaKnown RBP5.57□□□□□ -1.52
SRP54-214ENST00000630962 ZNF574Q6ZN55 896 aaPredicted RBP5.57□□□□□ -1.52
SRP54-214ENST00000630962 PPP1R13LQ8WUF5 828 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 KREMEN1Q96MU8 473 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 CNNM2Q9H8M5 875 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 UBP1Q9NZI7 540 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 U3KQE9 123 aa5.57□□□□□ -1.52
SRP54-214ENST00000630962 MEIS3P2A8K0S8 358 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 PRR33A8MZF0 331 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 CHURC1-FNTBB4DL54 471 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 H3BS24 57 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 RECKO95980 971 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 GK5Q6ZS86 529 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 NLRC3Q7RTR2 1065 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 WFDC3Q8IUB2 231 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 DTWD2Q8NBA8 298 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 RGS22Q8NE09 1264 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 FLAD1Q8NFF5 587 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 UBE2FQ969M7 185 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 DHRS1Q96LJ7 313 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 MBNL3Q9NUK0 354 aaKnown RBP5.56□□□□□ -1.52
SRP54-214ENST00000630962 ZSWIM5Q9P217 1185 aa5.56□□□□□ -1.52
SRP54-214ENST00000630962 DDX41Q9UJV9 622 aaKnown RBP5.56□□□□□ -1.52
SRP54-214ENST00000630962 RNASE1P07998 156 aaKnown RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 RAC2P15153 192 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 ENDOUP21128 410 aaKnown RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 CRKP46108 304 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 CLEC16AQ2KHT3 1053 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 ARSHQ5FYA8 562 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 TAB3Q8N5C8 712 aaPredicted RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 BAHD1Q8TBE0 780 aaPredicted RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 DHX38Q92620 1227 aaKnown RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 EAF1Q96JC9 268 aaPredicted RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 FMNL2Q96PY5 1086 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 FERD3LQ96RJ6 166 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 KIF2CQ99661 725 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 CARS2Q9HA77 564 aaKnown RBP5.55□□□□□ -1.52
SRP54-214ENST00000630962 ATP13A1Q9HD20 1204 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms