RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 PANK1Q8TE04 598 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 C11orf49Q9H6J7 331 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 OGDHLQ9ULD0 1010 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 A0A1W2PPC1 479 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 MNX1P50219 401 aaPredicted RBP23.06■■□□□ 1.28
SMN2-215ENST00000628696 CACNB2Q08289 660 aaPredicted RBP23.06■■□□□ 1.28
SMN2-215ENST00000628696 CCL14Q16627 93 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 WDR78Q5VTH9 848 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 POTEEQ6S8J3 1075 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 EHD4Q9H223 541 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 IL1RAPL2Q9NP60 686 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 CABP5Q9NP86 173 aa23.06■■□□□ 1.28
SMN2-215ENST00000628696 POLR3DP05423 398 aaPredicted RBP23.05■■□□□ 1.28
SMN2-215ENST00000628696 USP14P54578 494 aa23.05■■□□□ 1.28
SMN2-215ENST00000628696 MORN1Q5T089 497 aa23.05■■□□□ 1.28
SMN2-215ENST00000628696 ACER1Q8TDN7 264 aa23.05■■□□□ 1.28
SMN2-215ENST00000628696 USP6NLQ92738 828 aa23.05■■□□□ 1.28
SMN2-215ENST00000628696 C12orf42Q96LP6 360 aa23.05■■□□□ 1.28
SMN2-215ENST00000628696 RABGAP1Q9Y3P9 1069 aa23.05■■□□□ 1.28
SMN2-215ENST00000628696 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
SMN2-215ENST00000628696 SYN1P17600 705 aa23.04■■□□□ 1.28
SMN2-215ENST00000628696 PLCD1P51178 756 aa23.04■■□□□ 1.28
SMN2-215ENST00000628696 CCNA1P78396 465 aa23.04■■□□□ 1.28
SMN2-215ENST00000628696 APBB1O00213 710 aa23.03■■□□□ 1.28
SMN2-215ENST00000628696 SOX1O00570 391 aaPredicted RBP23.03■■□□□ 1.28
SMN2-215ENST00000628696 CCND3P30281 292 aaPredicted RBP23.03■■□□□ 1.28
SMN2-215ENST00000628696 HSP90AB4PQ58FF6 505 aa23.03■■□□□ 1.28
SMN2-215ENST00000628696 TMED8Q6PL24 325 aaPredicted RBP23.03■■□□□ 1.28
SMN2-215ENST00000628696 CATSPERGQ6ZRH7 1159 aa23.03■■□□□ 1.28
SMN2-215ENST00000628696 MIER1Q8N108 512 aa23.03■■□□□ 1.28
SMN2-215ENST00000628696 APBA2Q99767 749 aa23.03■■□□□ 1.28
SMN2-215ENST00000628696 RIOK1Q9BRS2 568 aaKnown RBP23.03■■□□□ 1.28
SMN2-215ENST00000628696 KIAA1683Q9H0B3 1180 aa23.03■■□□□ 1.28
SMN2-215ENST00000628696 CNMDO75829 334 aa23.02■■□□□ 1.28
SMN2-215ENST00000628696 GLRX3O76003 335 aaKnown RBP23.02■■□□□ 1.28
SMN2-215ENST00000628696 VCAM1P19320 739 aa23.02■■□□□ 1.28
SMN2-215ENST00000628696 SHMT1P34896 483 aa23.02■■□□□ 1.28
SMN2-215ENST00000628696 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
SMN2-215ENST00000628696 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
SMN2-215ENST00000628696 RHPN1Q8TCX5 695 aa23.02■■□□□ 1.28
SMN2-215ENST00000628696 LRCH3Q96II8 777 aa23.02■■□□□ 1.28
SMN2-215ENST00000628696 NAV1Q8NEY1 1877 aa23.01■■□□□ 1.27
SMN2-215ENST00000628696 MAP2K5Q13163 448 aa23.01■■□□□ 1.27
SMN2-215ENST00000628696 EDC3Q96F86 508 aaKnown RBP23.01■■□□□ 1.27
SMN2-215ENST00000628696 DNAJC2Q99543 621 aaKnown RBP23.01■■□□□ 1.27
SMN2-215ENST00000628696 GDF15Q99988 308 aa23.01■■□□□ 1.27
SMN2-215ENST00000628696 CRNKL1Q9BZJ0 848 aaKnown RBP23.01■■□□□ 1.27
SMN2-215ENST00000628696 RPAP3Q9H6T3 665 aaPredicted RBP23.01■■□□□ 1.27
SMN2-215ENST00000628696 MPHOSPH10O00566 681 aaKnown RBP23■■□□□ 1.27
SMN2-215ENST00000628696 PDE6AP16499 860 aa23■■□□□ 1.27
SMN2-215ENST00000628696 SEPT2Q15019 361 aa23■■□□□ 1.27
SMN2-215ENST00000628696 MCM9Q9NXL9 1143 aa23■■□□□ 1.27
SMN2-215ENST00000628696 GOLIM4O00461 696 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 BMP8BP34820 402 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 MFSD14CQ5VZR4 134 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 LHX8Q68G74 356 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 CLASRPQ8N2M8 674 aaKnown RBP22.99■■□□□ 1.27
SMN2-215ENST00000628696 BTBD7Q9P203 1132 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 IVNS1ABPQ9Y6Y0 642 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 PFASO15067 1338 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 ZNF532Q9HCE3 1301 aa22.99■■□□□ 1.27
SMN2-215ENST00000628696 SLC15A5A6NIM6 579 aa22.98■■□□□ 1.27
SMN2-215ENST00000628696 IFIT2P09913 472 aaKnown RBP22.98■■□□□ 1.27
SMN2-215ENST00000628696 PTPREP23469 700 aa22.98■■□□□ 1.27
SMN2-215ENST00000628696 GUCY1A2P33402 732 aa22.98■■□□□ 1.27
SMN2-215ENST00000628696 SPDYE16A6NNV3 312 aaPredicted RBP22.97■■□□□ 1.27
SMN2-215ENST00000628696 MAGEA10P43363 369 aaPredicted RBP22.97■■□□□ 1.27
SMN2-215ENST00000628696 ATP2B2Q01814 1243 aa22.97■■□□□ 1.27
SMN2-215ENST00000628696 EVX2Q03828 476 aa22.97■■□□□ 1.27
SMN2-215ENST00000628696 SDR42E1Q8WUS8 393 aa22.97■■□□□ 1.27
SMN2-215ENST00000628696 KIF1BPQ96EK5 621 aa22.97■■□□□ 1.27
SMN2-215ENST00000628696 FLRT1Q9NZU1 646 aa22.97■■□□□ 1.27
SMN2-215ENST00000628696 CNGA1P29973 690 aa22.96■■□□□ 1.27
SMN2-215ENST00000628696 GABPAQ06546 454 aa22.96■■□□□ 1.27
SMN2-215ENST00000628696 LBX2Q6XYB7 198 aa22.96■■□□□ 1.27
SMN2-215ENST00000628696 CYP2D6P10635 497 aa22.95■■□□□ 1.26
SMN2-215ENST00000628696 MS4A1P11836 297 aa22.95■■□□□ 1.26
SMN2-215ENST00000628696 COL6A1P12109 1028 aa22.95■■□□□ 1.26
SMN2-215ENST00000628696 MYH8P13535 1937 aa22.95■■□□□ 1.26
SMN2-215ENST00000628696 LCORLQ8N3X6 602 aa22.95■■□□□ 1.26
SMN2-215ENST00000628696 TANGO6Q9C0B7 1094 aa22.95■■□□□ 1.26
SMN2-215ENST00000628696 FRMPD3Q5JV73 1810 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 A0A1W2PRG0 241 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 HMMRO75330 724 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 COG2Q14746 738 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 LRRC26Q2I0M4 334 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 RPAP2Q8IXW5 612 aaPredicted RBP22.94■■□□□ 1.26
SMN2-215ENST00000628696 SLC44A5Q8NCS7 719 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 NPLOC4Q8TAT6 608 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.94■■□□□ 1.26
SMN2-215ENST00000628696 UBE2OQ9C0C9 1292 aaKnown RBP22.94■■□□□ 1.26
SMN2-215ENST00000628696 ARMT1Q9H993 441 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 DCP1AQ9NPI6 582 aaPredicted RBP22.94■■□□□ 1.26
SMN2-215ENST00000628696 HOXC10Q9NYD6 342 aa22.94■■□□□ 1.26
SMN2-215ENST00000628696 ZBED9Q6R2W3 1325 aa22.93■■□□□ 1.26
SMN2-215ENST00000628696 TCRBV5S4A2TA0A5A2 114 aa22.93■■□□□ 1.26
SMN2-215ENST00000628696 GRB14Q14449 540 aa22.93■■□□□ 1.26
SMN2-215ENST00000628696 DPP9Q86TI2 863 aa22.93■■□□□ 1.26
SMN2-215ENST00000628696 DYNLL2Q96FJ2 89 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms