RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 CAVIN4Q5BKX8 364 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 SH3RF1Q7Z6J0 888 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 GSDMAQ96QA5 445 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 BCL11BQ9C0K0 894 aaPredicted RBP21.86■■□□□ 1.09
PTBP1-220ENST00000627714 EFCAB8A8MWE9 144 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 SEMA3EO15041 775 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 ATP2B1P20020 1258 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 SPATA1Q5VX52 437 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 ANKRD18AQ8IVF6 992 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 PYM1Q9BRP8 204 aaKnown RBP21.86■■□□□ 1.09
PTBP1-220ENST00000627714 VPS54Q9P1Q0 977 aa21.86■■□□□ 1.09
PTBP1-220ENST00000627714 URI1O94763 535 aaPredicted RBP21.85■■□□□ 1.09
PTBP1-220ENST00000627714 ZNF827Q17R98 1081 aa21.85■■□□□ 1.09
PTBP1-220ENST00000627714 TRMT44Q8IYL2 757 aaKnown RBP21.85■■□□□ 1.09
PTBP1-220ENST00000627714 GRAMD1CQ8IYS0 662 aa21.85■■□□□ 1.09
PTBP1-220ENST00000627714 DHX58Q96C10 678 aa21.85■■□□□ 1.09
PTBP1-220ENST00000627714 PANX2Q96RD6 677 aa21.85■■□□□ 1.09
PTBP1-220ENST00000627714 CTAGE1Q96RT6 745 aa21.85■■□□□ 1.09
PTBP1-220ENST00000627714 THRAP3Q9Y2W1 955 aaKnown RBP21.85■■□□□ 1.09
PTBP1-220ENST00000627714 PARP3Q9Y6F1 533 aa21.85■■□□□ 1.09
PTBP1-220ENST00000627714 FAM193AP78312 1265 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 ARHGAP29Q52LW3 1261 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 TMED8Q6PL24 325 aaPredicted RBP21.84■■□□□ 1.09
PTBP1-220ENST00000627714 CLEC4GQ6UXB4 293 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 USP49Q70CQ1 688 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 NAA15Q9BXJ9 866 aaKnown RBP21.84■■□□□ 1.09
PTBP1-220ENST00000627714 SCN7AQ01118 1682 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 GOLGA8FQ08AF8 430 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 GOLGA8DPQ0D2H9 430 aa21.84■■□□□ 1.09
PTBP1-220ENST00000627714 SAMSN1Q9NSI8 373 aaKnown RBP21.84■■□□□ 1.09
PTBP1-220ENST00000627714 BSDC1Q9NW68 430 aaPredicted RBP21.84■■□□□ 1.09
PTBP1-220ENST00000627714 COL1A1P02452 1464 aaPredicted RBP21.83■■□□□ 1.09
PTBP1-220ENST00000627714 CASQ1P31415 396 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 TROAPQ12815 778 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 SF3B3Q15393 1217 aaKnown RBP21.83■■□□□ 1.09
PTBP1-220ENST00000627714 TMTC3Q6ZXV5 915 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 SHISA4Q96DD7 197 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 PAGE5Q96GU1 130 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 MED15Q96RN5 788 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 MYH2Q9UKX2 1941 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 SYNRGQ9UMZ2 1314 aa21.83■■□□□ 1.09
PTBP1-220ENST00000627714 AKR1B15C9JRZ8 316 aaPredicted RBP21.83■■□□□ 1.08
PTBP1-220ENST00000627714 TADA3O75528 432 aa21.83■■□□□ 1.08
PTBP1-220ENST00000627714 GYG1P46976 350 aa21.83■■□□□ 1.08
PTBP1-220ENST00000627714 DDB1Q16531 1140 aa21.83■■□□□ 1.08
PTBP1-220ENST00000627714 HSP90AA4PQ58FG1 418 aa21.83■■□□□ 1.08
PTBP1-220ENST00000627714 IQSEC3Q9UPP2 1182 aaPredicted RBP21.83■■□□□ 1.08
PTBP1-220ENST00000627714 V9GY48 417 aaPredicted RBP21.83■■□□□ 1.08
PTBP1-220ENST00000627714 TRAPPC10P48553 1259 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 CUL4BQ13620 913 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 LRRN4CLQ8ND94 238 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 SYMPKQ92797 1274 aaKnown RBP21.82■■□□□ 1.08
PTBP1-220ENST00000627714 TNFRSF25Q93038 417 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 ZNF446Q9NWS9 450 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 PDS5AQ29RF7 1337 aaKnown RBP21.82■■□□□ 1.08
PTBP1-220ENST00000627714 NPHP1O15259 732 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 ADKP55263 362 aaKnown RBP21.82■■□□□ 1.08
PTBP1-220ENST00000627714 DPYDQ12882 1025 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 ITPK1Q13572 414 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 EPSTI1Q96J88 318 aa21.82■■□□□ 1.08
PTBP1-220ENST00000627714 MYH14Q7Z406 1995 aaKnown RBP21.82■■□□□ 1.08
PTBP1-220ENST00000627714 ORC4O43929 436 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 CLCN6P51797 869 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 GNG11P61952 73 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 FILIP1LQ4L180 1135 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 TTC38Q5R3I4 469 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 CDKAL1Q5VV42 579 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 CREBRFQ8IUR6 639 aa21.81■■□□□ 1.08
PTBP1-220ENST00000627714 A0A087X0B3 334 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 FAM205CA6NFA0 338 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 PLEKHA8P1O95397 391 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 MAP3K9P80192 1104 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 ATP2C1P98194 919 aaPredicted RBP21.8■■□□□ 1.08
PTBP1-220ENST00000627714 PTPN21Q16825 1174 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 CTCFLQ8NI51 663 aaPredicted RBP21.8■■□□□ 1.08
PTBP1-220ENST00000627714 BAZ2AQ9UIF9 1905 aaKnown RBP21.8■■□□□ 1.08
PTBP1-220ENST00000627714 FANCGO15287 622 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 CCDC175P0C221 793 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 NT5C2P49902 561 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 CTR9Q6PD62 1173 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 TOGARAM2Q6ZUX3 1019 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 APTXQ7Z2E3 356 aaKnown RBP21.8■■□□□ 1.08
PTBP1-220ENST00000627714 PPFIBP1Q86W92 1011 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.8■■□□□ 1.081e-6■■□□□ 13.4
PTBP1-220ENST00000627714 CNTNAP5Q8WYK1 1306 aa21.8■■□□□ 1.08
PTBP1-220ENST00000627714 RGL2O15211 777 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 AFMP43652 599 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 EARS2Q5JPH6 523 aaKnown RBP21.79■■□□□ 1.08
PTBP1-220ENST00000627714 TMCO3Q6UWJ1 677 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 SMARCC1Q92922 1105 aaPredicted RBP21.79■■□□□ 1.08
PTBP1-220ENST00000627714 CARD6Q9BX69 1037 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 ADD3Q9UEY8 706 aaKnown RBP21.79■■□□□ 1.08
PTBP1-220ENST00000627714 LAMB1P07942 1786 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 ATP8B1O43520 1251 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 PRDM1O75626 825 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
PTBP1-220ENST00000627714 IQUBQ8NA54 791 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 CCDC51Q96ER9 411 aa21.79■■□□□ 1.08
PTBP1-220ENST00000627714 ZHX1Q9UKY1 873 aaPredicted RBP21.79■■□□□ 1.08
PTBP1-220ENST00000627714 SPATA31A1Q5TZJ5 1347 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms