RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 TRIM5Q9C035 493 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 TTC12Q9H892 705 aaPredicted RBP22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 A0A087WWV3 80 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 GPR75-ASB3A0A0A6YYF3 556 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 TFAP4Q01664 338 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 EN1Q05925 392 aaPredicted RBP22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 KIAA2012Q0VF49 1180 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 EZH2Q15910 746 aaKnown RBP22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 DHX40Q8IX18 779 aaKnown RBP22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 SP8Q8IXZ3 490 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 SRBD1Q8N5C6 995 aaKnown RBP22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 TBC1D22AQ8WUA7 517 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 ANKS1AQ92625 1134 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 CDK5RAP2Q96SN8 1893 aa22.68■■□□□ 1.22
PCDHB11-202ENST00000624887 BECN2A8MW95 431 aa22.68■■□□□ 1.22
PCDHB11-202ENST00000624887 SLC4A8Q2Y0W8 1093 aa22.68■■□□□ 1.22
PCDHB11-202ENST00000624887 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.68■■□□□ 1.22
PCDHB11-202ENST00000624887 SPC24Q8NBT2 197 aa22.68■■□□□ 1.22
PCDHB11-202ENST00000624887 FAM163AQ96GL9 167 aaPredicted RBP22.68■■□□□ 1.22
PCDHB11-202ENST00000624887 hCG_1642624A0A1W2PR95 340 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 PPEF1O14829 653 aaPredicted RBP22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 PTPREP23469 700 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 KRT2P35908 639 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 BTDP43251 543 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 ZRSR1Q15695 479 aaKnown RBP22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 DYNLL2Q96FJ2 89 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 CABP5Q9NP86 173 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 IL17RBQ9NRM6 502 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 CEP131Q9UPN4 1083 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 NRXN2Q9P2S2 1712 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 C6orf229H3BNL8 230 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 CCDC178Q5BJE1 867 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 MFSD14BQ5SR56 506 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 BPIFA3Q9BQP9 254 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 MKNK2Q9HBH9 465 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 FBXO2Q9UK22 296 aaPredicted RBP22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 PCDHB6Q9Y5E3 794 aa22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 MORC2Q9Y6X9 1032 aaPredicted RBP22.67■■□□□ 1.22
PCDHB11-202ENST00000624887 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 PLCG2P16885 1265 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 KIF5BP33176 963 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 SLF2Q8IX21 1173 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 KAT14Q9H8E8 782 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 TCP11L1Q9NUJ3 509 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 KCNH3Q9ULD8 1083 aa22.66■■□□□ 1.22
PCDHB11-202ENST00000624887 NLRP12P59046 1061 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 MAPKAPK5Q8IW41 473 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 ATP6V0A2Q9Y487 856 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 PLCD1P51178 756 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 DPCR1Q3MIW9 517 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 ZNF579Q8NAF0 562 aaKnown RBP22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 PIBF1Q8WXW3 757 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 BRMS1Q9HCU9 246 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 TUBE1Q9UJT0 475 aa22.65■■□□□ 1.22
PCDHB11-202ENST00000624887 GAKO14976 1311 aa22.64■■□□□ 1.22
PCDHB11-202ENST00000624887 DDX60LQ5H9U9 1706 aaKnown RBP22.64■■□□□ 1.22
PCDHB11-202ENST00000624887 CDC25BP30305 580 aa22.64■■□□□ 1.21
PCDHB11-202ENST00000624887 NPY5RQ15761 445 aa22.64■■□□□ 1.21
PCDHB11-202ENST00000624887 ELOA2Q8IYF1 753 aaPredicted RBP22.64■■□□□ 1.21
PCDHB11-202ENST00000624887 NAP1L5Q96NT1 182 aaPredicted RBP22.64■■□□□ 1.21
PCDHB11-202ENST00000624887 SRPRBQ9Y5M8 271 aaKnown RBP22.64■■□□□ 1.21
PCDHB11-202ENST00000624887 SRGNP10124 158 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 SCG2P13521 617 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 SLC15A2Q16348 729 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 TEX11Q8IYF3 940 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 ZNF444Q8N0Y2 327 aaPredicted RBP22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 AOPEPQ8N6M6 819 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 PNMA1Q8ND90 353 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 KCNF1Q9H3M0 494 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 ZNF287Q9HBT7 754 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 TSPY3P0CV98 308 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 TSPY8P0CW00 308 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 RHBDL3P58872 404 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 PFKFB3Q16875 520 aaPredicted RBP22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 KRBA2Q6ZNG9 492 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 TNFRSF25Q93038 417 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 FBXW7Q969H0 707 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 FAM13BQ9NYF5 915 aa22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 SAP30BPQ9UHR5 308 aaKnown RBP22.63■■□□□ 1.21
PCDHB11-202ENST00000624887 TRIM75PA6NK02 468 aa22.62■■□□□ 1.21
PCDHB11-202ENST00000624887 NPR1P16066 1061 aa22.62■■□□□ 1.21
PCDHB11-202ENST00000624887 LONRF3Q496Y0 759 aa22.62■■□□□ 1.21
PCDHB11-202ENST00000624887 EARS2Q5JPH6 523 aaKnown RBP22.62■■□□□ 1.21
PCDHB11-202ENST00000624887 MRFAP1L1Q96HT8 127 aa22.62■■□□□ 1.21
PCDHB11-202ENST00000624887 COA1Q9GZY4 146 aa22.62■■□□□ 1.21
PCDHB11-202ENST00000624887 FAM205CA6NFA0 338 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 MMP10P09238 476 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 RASA1P20936 1047 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 GRIN1Q05586 938 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 SF3B2Q13435 895 aaKnown RBP22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 DRC7Q8IY82 874 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 SLC44A5Q8NCS7 719 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 FLT1P17948 1338 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 USP17L3A6NCW0 530 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 USP17L4A6NCW7 530 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 BIN1O00499 593 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 ATP2B1P20020 1258 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 C16orf86Q6ZW13 317 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms