RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 LEO1Q8WVC0 666 aaPredicted RBP24.89■■□□□ 1.57
SPAST-204ENST00000621856 IDI2Q9BXS1 227 aa24.89■■□□□ 1.57
SPAST-204ENST00000621856 STX8Q9UNK0 236 aa24.89■■□□□ 1.57
SPAST-204ENST00000621856 BCS1LQ9Y276 419 aa24.89■■□□□ 1.57
SPAST-204ENST00000621856 KIF5BP33176 963 aa24.88■■□□□ 1.57
SPAST-204ENST00000621856 GUCY1A2P33402 732 aa24.88■■□□□ 1.57
SPAST-204ENST00000621856 PTGER2P43116 358 aa24.88■■□□□ 1.57
SPAST-204ENST00000621856 KIF23Q02241 960 aaPredicted RBP24.88■■□□□ 1.57
SPAST-204ENST00000621856 TCP10Q12799 353 aa24.88■■□□□ 1.57
SPAST-204ENST00000621856 ATL3Q6DD88 541 aa24.88■■□□□ 1.57
SPAST-204ENST00000621856 BRAPQ7Z569 592 aa24.88■■□□□ 1.57
SPAST-204ENST00000621856 TDRD3Q9H7E2 651 aaKnown RBP24.88■■□□□ 1.57
SPAST-204ENST00000621856 GNL2Q13823 731 aaKnown RBP24.87■■□□□ 1.57
SPAST-204ENST00000621856 ZFPM1Q8IX07 1006 aa24.87■■□□□ 1.57
SPAST-204ENST00000621856 FAM198AQ9UFP1 575 aa24.87■■□□□ 1.57
SPAST-204ENST00000621856 SYAP1Q96A49 352 aaPredicted RBP24.86■■□□□ 1.57
SPAST-204ENST00000621856 DHX36Q9H2U1 1008 aaKnown RBP24.86■■□□□ 1.57
SPAST-204ENST00000621856 CEBPZQ03701 1054 aaKnown RBP24.86■■□□□ 1.57
SPAST-204ENST00000621856 ZSCAN23Q3MJ62 389 aa24.86■■□□□ 1.57
SPAST-204ENST00000621856 ZSCAN29Q8IWY8 852 aaPredicted RBP24.86■■□□□ 1.57
SPAST-204ENST00000621856 OGFOD1Q8N543 542 aa24.86■■□□□ 1.57
SPAST-204ENST00000621856 JDP2Q8WYK2 163 aa24.86■■□□□ 1.57
SPAST-204ENST00000621856 GMLQ99445 158 aa24.86■■□□□ 1.57
SPAST-204ENST00000621856 TMEM47Q9BQJ4 181 aa24.86■■□□□ 1.57
SPAST-204ENST00000621856 TMEM63CQ9P1W3 806 aa24.86■■□□□ 1.57
SPAST-204ENST00000621856 ZBTB12Q9Y330 459 aaPredicted RBP24.86■■□□□ 1.57
SPAST-204ENST00000621856 KIF28PB7ZC32 967 aa24.85■■□□□ 1.57
SPAST-204ENST00000621856 PRPF3O43395 683 aaKnown RBP24.85■■□□□ 1.57
SPAST-204ENST00000621856 NPM3O75607 178 aaKnown RBP24.85■■□□□ 1.57
SPAST-204ENST00000621856 FUT2Q10981 343 aa24.85■■□□□ 1.57
SPAST-204ENST00000621856 PRMT6Q96LA8 375 aaPredicted RBP24.85■■□□□ 1.57
SPAST-204ENST00000621856 MAP3K14Q99558 947 aa24.85■■□□□ 1.57
SPAST-204ENST00000621856 EHD4Q9H223 541 aa24.85■■□□□ 1.57
SPAST-204ENST00000621856 PLIN4Q96Q06 1357 aa24.84■■□□□ 1.57
SPAST-204ENST00000621856 GOLGA6L4A6NEF3 574 aa24.84■■□□□ 1.57
SPAST-204ENST00000621856 SAFBQ15424 915 aaKnown RBP eCLIP24.84■■□□□ 1.57
SPAST-204ENST00000621856 USP28Q96RU2 1077 aa24.84■■□□□ 1.57
SPAST-204ENST00000621856 TMOD2Q9NZR1 351 aa24.84■■□□□ 1.57
SPAST-204ENST00000621856 V9GY48 417 aaPredicted RBP24.84■■□□□ 1.57
SPAST-204ENST00000621856 CNTNAP5Q8WYK1 1306 aa24.84■■□□□ 1.57
SPAST-204ENST00000621856 NFKBIEO00221 500 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 AKR1B1P15121 316 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 GRM4Q14833 912 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 DLGAP5Q15398 846 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 SRBD1Q8N5C6 995 aaKnown RBP24.83■■□□□ 1.57
SPAST-204ENST00000621856 CEP95Q96GE4 821 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 MTMR7Q9Y216 660 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 GOLGA6L3A6NEY3 463 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 TOP1P11387 765 aaKnown RBP24.83■■□□□ 1.57
SPAST-204ENST00000621856 XBP1P17861 261 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 SHMT1P34896 483 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 AGBL3Q8NEM8 1001 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 TRIM34Q9BYJ4 488 aa24.83■■□□□ 1.57
SPAST-204ENST00000621856 FTOQ9C0B1 505 aaKnown RBP eCLIP24.83■■□□□ 1.57
SPAST-204ENST00000621856 SIPA1L1O43166 1804 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 SPDYE2BA6NHP3 402 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 ENTPD3O75355 529 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 SPDYE6P0CI01 402 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 GNAQP50148 359 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 CXCL9Q07325 125 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 MYSM1Q5VVJ2 828 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 CIAPIN1Q6FI81 312 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 PI4KBQ9UBF8 816 aa24.82■■□□□ 1.56
SPAST-204ENST00000621856 hCG_1642624A0A1W2PR95 340 aa24.81■■□□□ 1.56
SPAST-204ENST00000621856 DDTLA6NHG4 134 aaPredicted RBP24.81■■□□□ 1.56
SPAST-204ENST00000621856 MMP1P03956 469 aa24.81■■□□□ 1.56
SPAST-204ENST00000621856 RCOR1Q9UKL0 485 aa24.81■■□□□ 1.56
SPAST-204ENST00000621856 KCNJ14Q9UNX9 436 aa24.81■■□□□ 1.56
SPAST-204ENST00000621856 PKN1Q16512 942 aa24.81■■□□□ 1.56
SPAST-204ENST00000621856 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.81■■□□□ 1.56
SPAST-204ENST00000621856 MPHOSPH10O00566 681 aaKnown RBP24.8■■□□□ 1.56
SPAST-204ENST00000621856 SH3BP5LQ7L8J4 393 aa24.8■■□□□ 1.56
SPAST-204ENST00000621856 MTMR4Q9NYA4 1195 aa24.8■■□□□ 1.56
SPAST-204ENST00000621856 RTEL1Q9NZ71 1219 aa24.8■■□□□ 1.56
SPAST-204ENST00000621856 U2AF2P26368 475 aaKnown RBP eCLIP24.79■■□□□ 1.56
SPAST-204ENST00000621856 ZNF445P59923 1031 aa24.79■■□□□ 1.56
SPAST-204ENST00000621856 DIS3L2Q8IYB7 885 aaKnown RBP24.79■■□□□ 1.56
SPAST-204ENST00000621856 STAG2Q8N3U4 1231 aa24.79■■□□□ 1.56
SPAST-204ENST00000621856 NLGN2Q8NFZ4 835 aa24.79■■□□□ 1.56
SPAST-204ENST00000621856 MAD2L2Q9UI95 211 aa24.79■■□□□ 1.56
SPAST-204ENST00000621856 ARFGEF1Q9Y6D6 1849 aa24.79■■□□□ 1.56
SPAST-204ENST00000621856 CLRN2A0PK11 232 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 NOVP48745 357 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 TNIP1Q15025 636 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 CCDC183Q5T5S1 534 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 PIBF1Q8WXW3 757 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 CCDC17Q96LX7 622 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 VPS54Q9P1Q0 977 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 ZNF70Q9UC06 446 aaPredicted RBP24.78■■□□□ 1.56
SPAST-204ENST00000621856 LTBP3Q9NS15 1303 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 IGKV6D-41A0A0C4DH26 115 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 FSD2A1L4K1 749 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 RASSF7Q02833 373 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 STK38Q15208 465 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 L1TD1Q5T7N2 865 aaKnown RBP24.78■■□□□ 1.56
SPAST-204ENST00000621856 FOXP4Q8IVH2 680 aaPredicted RBP24.78■■□□□ 1.56
SPAST-204ENST00000621856 BICD2Q8TD16 824 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 PGBD1Q96JS3 809 aa24.78■■□□□ 1.56
SPAST-204ENST00000621856 ISY1Q9ULR0 285 aaKnown RBP24.78■■□□□ 1.56
SPAST-204ENST00000621856 COL2A1P02458 1487 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms