RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 SEC23AQ15436 765 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 MCTP2Q6DN12 878 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 FANCBQ8NB91 859 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 DRC1Q96MC2 740 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 C16orf45Q96MC5 204 aaPredicted RBP20.06■□□□□ 0.8
TRA2A-212ENST00000621813 ZKSCAN3Q9BRR0 538 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 CRNKL1Q9BZJ0 848 aaKnown RBP20.06■□□□□ 0.8
TRA2A-212ENST00000621813 ATP8A2Q9NTI2 1148 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 SUFUQ9UMX1 484 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 LEMD3Q9Y2U8 911 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 UBR3Q6ZT12 1888 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 TNKSO95271 1327 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 KIF3CO14782 793 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 AP5Z1O43299 807 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 SLU7O95391 586 aaKnown RBP20.06■□□□□ 0.8
TRA2A-212ENST00000621813 NT5C2P49902 561 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 GYS2P54840 703 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 EP400NLQ6ZTU2 488 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.06■□□□□ 0.8
TRA2A-212ENST00000621813 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 ZNF384Q8TF68 577 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 PPM1EQ8WY54 764 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 SDF4Q9BRK5 362 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 FHOD1Q9Y613 1164 aa20.06■□□□□ 0.8
TRA2A-212ENST00000621813 KLRK1P26718 216 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 NDUFA8P51970 172 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 DYNLL1P63167 89 aaKnown RBP20.05■□□□□ 0.8
TRA2A-212ENST00000621813 GRAPQ13588 217 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 FAM182BQ5T319 152 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 AMIGO3Q86WK7 504 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 CNBD1Q8NA66 436 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 GRAPLQ8TC17 118 aaPredicted RBP20.05■□□□□ 0.8
TRA2A-212ENST00000621813 ZSCAN10Q96SZ4 725 aaPredicted RBP20.05■□□□□ 0.8
TRA2A-212ENST00000621813 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRA2A-212ENST00000621813 NAT10Q9H0A0 1025 aaKnown RBP20.05■□□□□ 0.8
TRA2A-212ENST00000621813 ST7Q9NRC1 585 aa20.05■□□□□ 0.8
TRA2A-212ENST00000621813 ARGLU1Q9NWB6 273 aaPredicted RBP20.05■□□□□ 0.8
TRA2A-212ENST00000621813 IRS2Q9Y4H2 1338 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 A0A1B0GVL5 298 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 GOLGA6L19H0YKK7 550 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 MMP1P03956 469 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 SLC3A2P08195 630 aaKnown RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 CALM1P0DP23 149 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 CALM2P0DP24 149 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 CALM3P0DP25 149 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 NBPF11Q86T75 865 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 CRACR2BQ8N4Y2 399 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 NEK11Q8NG66 645 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 PLCD4Q9BRC7 762 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 TACO1Q9BSH4 297 aaKnown RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 TFCP2L1Q9NZI6 479 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 NAA30Q147X3 362 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 NFIXQ14938 502 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 TPD52L1Q16890 204 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 ZNF772Q68DY9 489 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 FAM196AQ6ZSG2 479 aa20.04■□□□□ 0.8
TRA2A-212ENST00000621813 RNF26Q9BY78 433 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 FOXP1Q9H334 677 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-212ENST00000621813 PNMA6AP0CW24 399 aaPredicted RBP20.03■□□□□ 0.8
TRA2A-212ENST00000621813 NOSTRINQ8IVI9 506 aa20.03■□□□□ 0.8
TRA2A-212ENST00000621813 CEP57L1Q8IYX8 460 aa20.03■□□□□ 0.8
TRA2A-212ENST00000621813 ZNF215Q9UL58 517 aaPredicted RBP20.03■□□□□ 0.8
TRA2A-212ENST00000621813 PPP1R12AO14974 1030 aaPredicted RBP20.02■□□□□ 0.8
TRA2A-212ENST00000621813 ORC4O43929 436 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 IQCB1Q15051 598 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 PTPAQ15257 358 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 ZRSR1Q15695 479 aaKnown RBP20.02■□□□□ 0.8
TRA2A-212ENST00000621813 SBK1Q52WX2 424 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 CATIPQ7Z7H3 387 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 WDR66Q8TBY9 1149 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 NUP133Q8WUM0 1156 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 MAP3K14Q99558 947 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.8
TRA2A-212ENST00000621813 XDHP47989 1333 aa20.02■□□□□ 0.8
TRA2A-212ENST00000621813 NEMFO60524 1076 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 XBP1P17861 261 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 HMGB2P26583 209 aaKnown RBP20.02■□□□□ 0.79
TRA2A-212ENST00000621813 PLA2G4AP47712 749 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 IFIT1BQ5T764 474 aaKnown RBP20.02■□□□□ 0.79
TRA2A-212ENST00000621813 SARM1Q6SZW1 724 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 PLA2G4DQ86XP0 818 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 ENAHQ8N8S7 591 aaPredicted RBP20.02■□□□□ 0.79
TRA2A-212ENST00000621813 DCP1AQ9NPI6 582 aaPredicted RBP20.02■□□□□ 0.79
TRA2A-212ENST00000621813 KIAA1468Q9P260 1216 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.79
TRA2A-212ENST00000621813 FAM237AA0A1B0GTK4 181 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 USP17L12C9JPN9 530 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 USP17L21D6R901 530 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 ZNF202O95125 648 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 CPP00450 1065 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 AKAP17AQ02040 695 aaKnown RBP20.01■□□□□ 0.79
TRA2A-212ENST00000621813 ELF2Q15723 593 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 RILPL1Q5EBL4 403 aa20.01■□□□□ 0.79
TRA2A-212ENST00000621813 C15orf52Q6ZUT6 534 aaKnown RBP20.01■□□□□ 0.79
TRA2A-212ENST00000621813 DZIP1Q86YF9 867 aaKnown RBP20.01■□□□□ 0.79
TRA2A-212ENST00000621813 SEPT12Q8IYM1 358 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms