RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TEKT1Q969V4 418 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 MAST2Q6P0Q8 1798 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 GOLGA8HP0CJ92 632 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 KIF5BP33176 963 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 RHBDL3P58872 404 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 TYRO3Q06418 890 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 NOSTRINQ8IVI9 506 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
VTA1-205ENST00000620996 USP25Q9UHP3 1055 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
VTA1-205ENST00000620996 PPIP5K2O43314 1243 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 FGRP09769 529 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 ZRSR1Q15695 479 aaKnown RBP11.45□□□□□ -0.58
VTA1-205ENST00000620996 STYK1Q6J9G0 422 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 TMTC3Q6ZXV5 915 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
VTA1-205ENST00000620996 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 IL17RBQ9NRM6 502 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 YEATS4O95619 227 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 SRBD1Q8N5C6 995 aaKnown RBP11.44□□□□□ -0.58
VTA1-205ENST00000620996 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 A0A087WWV3 80 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 RASA1P20936 1047 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 NLRP5P59047 1200 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 FAM160A1Q05DH4 1040 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 ANO6Q4KMQ2 910 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 PCDHAC2Q9Y5I4 1007 aa11.44□□□□□ -0.58
VTA1-205ENST00000620996 NDUFA8P51970 172 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 PPP2R5BQ15173 497 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 SPECC1Q5M775 1068 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 CLIC6Q96NY7 704 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 KRT2P35908 639 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 CRKP46108 304 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 RCAN1P53805 252 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 PODNQ7Z5L7 613 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 HOMER1Q86YM7 354 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 STAG2Q8N3U4 1231 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 GPKOWQ92917 476 aaPredicted RBP eCLIP11.43□□□□□ -0.58
VTA1-205ENST00000620996 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 DDX4Q9NQI0 724 aaKnown RBP11.43□□□□□ -0.58
VTA1-205ENST00000620996 GAKO14976 1311 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 PRPF3O43395 683 aaKnown RBP11.43□□□□□ -0.58
VTA1-205ENST00000620996 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 ADALQ6DHV7 355 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
VTA1-205ENST00000620996 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 SLURP2P0DP57 97 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 CLEC10AQ8IUN9 316 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 DNAJC25Q9H1X3 360 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 BAZ2BQ9UIF8 2168 aaKnown RBP11.42□□□□□ -0.58
VTA1-205ENST00000620996 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
VTA1-205ENST00000620996 ESPNB1AK53 854 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 U2AF2P26368 475 aaKnown RBP eCLIP11.42□□□□□ -0.584e-6■■□□□ 13.2
VTA1-205ENST00000620996 SLC39A14Q15043 492 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 CDC42EP5Q6NZY7 148 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 C16orf86Q6ZW13 317 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 HEATR3Q7Z4Q2 680 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 DGKHQ86XP1 1220 aa11.42□□□□□ -0.58
VTA1-205ENST00000620996 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
VTA1-205ENST00000620996 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
VTA1-205ENST00000620996 CNTNAP5Q8WYK1 1306 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 FAM196BA6NMK8 535 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 WDHD1O75717 1129 aaPredicted RBP11.41□□□□□ -0.58
VTA1-205ENST00000620996 HLA-DOAP06340 250 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 NFIAQ12857 509 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 PKN1Q16512 942 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 LUZP1Q86V48 1076 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 LRRC47Q8N1G4 583 aaKnown RBP11.41□□□□□ -0.58
VTA1-205ENST00000620996 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
VTA1-205ENST00000620996 MRVI1Q9Y6F6 885 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 NID2Q14112 1375 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 BIN1O00499 593 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 IGSF3O75054 1194 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 SCG2P13521 617 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 PFKFB1P16118 471 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 FOXP1Q9H334 677 aaPredicted RBP11.41□□□□□ -0.58
VTA1-205ENST00000620996 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 RAD17O75943 681 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 SUGT1Q9Y2Z0 365 aa11.41□□□□□ -0.58
VTA1-205ENST00000620996 FRMPD2Q68DX3 1309 aaPredicted RBP11.4□□□□□ -0.58
VTA1-205ENST00000620996 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
VTA1-205ENST00000620996 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.58
VTA1-205ENST00000620996 ISM2Q6H9L7 571 aa11.4□□□□□ -0.58
VTA1-205ENST00000620996 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
VTA1-205ENST00000620996 ZNF830Q96NB3 372 aaPredicted RBP11.4□□□□□ -0.58
VTA1-205ENST00000620996 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.58
VTA1-205ENST00000620996 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
VTA1-205ENST00000620996 NAV1Q8NEY1 1877 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms