RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CAP2P40123 477 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 GCLCP48506 637 aaPredicted RBP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 CDK8P49336 464 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 USP14P54578 494 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 SP3Q02447 781 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 CTDSPL2Q05D32 466 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 DGKZQ13574 1117 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 KIF22Q14807 665 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 SH3D19Q5HYK7 790 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 C16orf86Q6ZW13 317 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 PRRT2Q7Z6L0 340 aaPredicted RBP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 NBPF11Q86T75 865 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 SIAH1Q8IUQ4 282 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 TBC1D10CQ8IV04 446 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 STK11IPQ8N1F8 1099 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 CCDC17Q96LX7 622 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 PARK7Q99497 189 aaKnown RBP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 ESYT1Q9BSJ8 1104 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 LSG1Q9H089 658 aaKnown RBP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 SERPINB13Q9UIV8 391 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 SYNPO2Q9UMS6 1093 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 AFG3L2Q9Y4W6 797 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 PHIPQ8WWQ0 1821 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 RANBP2P49792 3224 aaKnown RBP6.23□□□□□ -1.41
SHMT1-211ENST00000618902 CCL15-CCL14A0A0B4J2E2 113 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 HIP1O00291 1037 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 CDC45O75419 566 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 PRDM1O75626 825 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 GH2P01242 217 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 HOXA7P31268 230 aaPredicted RBP6.23□□□□□ -1.41
SHMT1-211ENST00000618902 TDO2P48775 406 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 RGS19P49795 217 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
SHMT1-211ENST00000618902 HAND2P61296 217 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 PPARAQ07869 468 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 CCL15Q16663 113 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 C8orf34Q49A92 452 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 FBXO46Q6PJ61 603 aaPredicted RBP6.23□□□□□ -1.41
SHMT1-211ENST00000618902 CRACR2BQ8N4Y2 399 aaPredicted RBP6.23□□□□□ -1.41
SHMT1-211ENST00000618902 ZNF280CQ8ND82 737 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 ACER1Q8TDN7 264 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
SHMT1-211ENST00000618902 BRI3BPQ8WY22 251 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 OTUD5Q96G74 571 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 PTPN18Q99952 460 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 NACAP1Q9BZK3 213 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 NAPBQ9H115 298 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 R3HDMLQ9H3Y0 253 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 SH2D4AQ9H788 454 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 ANAPC4Q9UJX5 808 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 ZBTB21Q9ULJ3 1066 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 ZMYM6O95789 1325 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 NEDD4P46934 1319 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 RAD50Q92878 1312 aa6.23□□□□□ -1.41
SHMT1-211ENST00000618902 CASP8AP2Q9UKL3 1982 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 DOCK1Q14185 1865 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 IGKV6D-41A0A0C4DH26 115 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 A0A1W2PRG0 241 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 IGF2BP3O00425 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
SHMT1-211ENST00000618902 FGRP09769 529 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 PCP11498 1178 aaKnown RBP6.22□□□□□ -1.41
SHMT1-211ENST00000618902 PTMSP20962 102 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 BACE1P56817 501 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 GSE1Q14687 1217 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 SEPT2Q15019 361 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 TAF1CQ15572 869 aaPredicted RBP6.22□□□□□ -1.41
SHMT1-211ENST00000618902 CERKLQ49MI3 558 aaPredicted RBP6.22□□□□□ -1.41
SHMT1-211ENST00000618902 KIAA1755Q5JYT7 1200 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 GPAT2Q6NUI2 795 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 STOX1Q6ZVD7 989 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 MAP4K1Q92918 833 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 DSCC1Q9BVC3 393 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 CABP5Q9NP86 173 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 ARPP21Q9UBL0 812 aaPredicted RBP6.22□□□□□ -1.41
SHMT1-211ENST00000618902 AGTPBP1Q9UPW5 1226 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 ZHX2Q9Y6X8 837 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 DNAH12Q6ZR08 3092 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 PTPRFP10586 1907 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 GREB1LQ9C091 1923 aaPredicted RBP6.22□□□□□ -1.41
SHMT1-211ENST00000618902 CEP290O15078 2479 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 ATAD5Q96QE3 1844 aa6.22□□□□□ -1.41
SHMT1-211ENST00000618902 TNRC18O15417 2968 aaPredicted RBP6.21□□□□□ -1.41
SHMT1-211ENST00000618902 TRIM75PA6NK02 468 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 BTBD19C9JJ37 291 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L10C9JJH3 530 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 ORC4O43929 436 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 NMT2O60551 498 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 SEC24BO95487 1268 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 SLC3A2P08195 630 aaKnown RBP6.21□□□□□ -1.42
SHMT1-211ENST00000618902 CYP21A2P08686 494 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 OSBPP22059 807 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 SPP2Q13103 211 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 CRHR2Q13324 411 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 NBR1Q14596 966 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 FAM110CQ1W6H9 321 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 ABCB5Q2M3G0 1257 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 FAM47AQ5JRC9 791 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 POTEEQ6S8J3 1075 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms