RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 EYA1Q99502 592 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 UFL1O94874 794 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 CDC25BP30305 580 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 HIBADHP31937 336 aaKnown RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 HPDP32754 393 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 IRX4P78413 519 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 NEDD9Q14511 834 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 NONOQ15233 471 aaKnown RBP eCLIP5.07□□□□□ -1.69e-7■■■■□ 20.8
CHD9-221ENST00000615216 GRK7Q8WTQ7 553 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 VTI1AQ96AJ9 217 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 ITSN1Q15811 1721 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 INPP5BP32019 993 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 MAP3K21Q5TCX8 1036 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 TSPYL6Q8N831 410 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 CCDC89Q8N998 374 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 TRIML1Q8N9V2 468 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SPATA5Q8NB90 893 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 KIF3CO14782 793 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 PCP11498 1178 aaKnown RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 PHBP35232 272 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 GKAP1Q5VSY0 366 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 CPSF2Q9P2I0 782 aaKnown RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHD9-221ENST00000615216 PTPRTO14522 1441 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 SH3BP5O60239 455 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 PPFIA4O75335 1185 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 SLC17A8Q8NDX2 589 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ATP2A3Q93084 1043 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 RBSNQ9H1K0 784 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 MRPL44Q9H9J2 332 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 EFCAB6Q5THR3 1501 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 NBPF14Q5TI25 921 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 SLFN12Q8IYM2 578 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 MCUR1Q96AQ8 359 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 PHACTR3Q96KR7 559 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 IFIH1Q9BYX4 1025 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 GPCPD1Q9NPB8 672 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ZBTB21Q9ULJ3 1066 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ABCC4O15439 1325 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 SAMD9LQ8IVG5 1584 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 GOLGA8KD6RF30 607 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 NDUFAB1O14561 156 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 CASQ2O14958 399 aaPredicted RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 UAP1Q16222 522 aaPredicted RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 TRIM58Q8NG06 486 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 TEKT1Q969V4 418 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 SAP30BPQ9UHR5 308 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 CCDC169A6NNP5 214 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 CHL1O00533 1208 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 RPS6KA1Q15418 735 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 RPUSD2Q8IZ73 545 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 REXO1Q8N1G1 1221 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 LRRC59Q96AG4 307 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 PEX26Q7Z412 305 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ARMT1Q9H993 441 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 MAP3K19Q56UN5 1328 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 TLDC2A0PJX2 215 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ATP5JP18859 108 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ZNF274Q96GC6 653 aaPredicted RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 GIPC1O14908 333 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 GNPATO15228 680 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 RXRAP19793 462 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 GCKRQ14397 625 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 HHATQ5VTY9 493 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 NSMCE1Q8WV22 266 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 PLIN2Q99541 437 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 VPS16Q9H269 839 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 PPANQ9NQ55 473 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 NOP56O00567 594 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 RIOK3O14730 519 aaKnown RBP5.06□□□□□ -1.6
CHD9-221ENST00000615216 GCP02774 474 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 MIS12Q9H081 205 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 ADCY9O60503 1353 aa5.06□□□□□ -1.6
CHD9-221ENST00000615216 DAPK3O43293 454 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 GCNT3O95395 438 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 KRT9P35527 623 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 DNM2P50570 870 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 IRX3P78415 501 aaPredicted RBP5.05□□□□□ -1.6
CHD9-221ENST00000615216 NUF2Q9BZD4 464 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 ZBED4O75132 1171 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 DDAH1O94760 285 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 HSPA1LP34931 641 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 NCAPH2Q6IBW4 605 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 OTUD6AQ7L8S5 288 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 HACE1Q8IYU2 909 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 SNX29Q8TEQ0 813 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 HAUS1Q96CS2 278 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 C8orf37Q96NL8 207 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 CARD14Q9BXL6 1004 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 ASIC3Q9UHC3 531 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 EIF3CLB5ME19 914 aaKnown RBP5.05□□□□□ -1.6
CHD9-221ENST00000615216 GEN1Q17RS7 908 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 EIF3CQ99613 913 aaKnown RBP5.05□□□□□ -1.6
CHD9-221ENST00000615216 NSFL1CQ9UNZ2 370 aaKnown RBP5.05□□□□□ -1.6
CHD9-221ENST00000615216 CHMP2AO43633 222 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 PCK1P35558 622 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 PDE6BP35913 854 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 NAA25Q14CX7 972 aa5.05□□□□□ -1.6
CHD9-221ENST00000615216 ELF2Q15723 593 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms