RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 CA8P35219 290 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 SH3BGRP55822 239 aaPredicted RBP19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 TTC16Q8NEE8 873 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 ARHGEF2Q92974 986 aaKnown RBP19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 HSPA1LP34931 641 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 RASSF2P50749 326 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 CCDC125Q86Z20 511 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 PLXNC1O60486 1568 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 GIPC1O14908 333 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 CEP104O60308 925 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 CCDC38Q502W7 563 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 HERC4Q5GLZ8 1057 aaPredicted RBP19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 ARPP21Q9UBL0 812 aaPredicted RBP19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 PNMA2Q9UL42 364 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 NBPF14Q5TI25 921 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 ADALQ6DHV7 355 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 PDE6BP35913 854 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 TSC1Q92574 1164 aa19.28■□□□□ 0.68
HMGXB3-206ENST00000613459 GALNT17Q6IS24 598 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 TRIM58Q8NG06 486 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 GOLGA5Q8TBA6 731 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 TFCP2L1Q9NZI6 479 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 AKNAD1Q5T1N1 836 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 NCAPH2Q6IBW4 605 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 RNF10Q8N5U6 811 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 ZBED4O75132 1171 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 GOLGA8KD6RF30 607 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 N4BP1O75113 896 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 P4HA1P13674 534 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 TIMM10P62072 90 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 PEX26Q7Z412 305 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 NUF2Q9BZD4 464 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.68
HMGXB3-206ENST00000613459 DAPK3O43293 454 aa19.27■□□□□ 0.67
HMGXB3-206ENST00000613459 BRD1O95696 1058 aa19.27■□□□□ 0.67
HMGXB3-206ENST00000613459 RAB3IPQ96QF0 476 aaPredicted RBP19.27■□□□□ 0.67
HMGXB3-206ENST00000613459 SAP30BPQ9UHR5 308 aaKnown RBP19.27■□□□□ 0.67
HMGXB3-206ENST00000613459 KIAA0556O60303 1618 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 MAST1Q9Y2H9 1570 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 SH3BP5O60239 455 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 PPP1R21Q6ZMI0 780 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 SDCCAG8Q86SQ7 713 aaPredicted RBP19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 TEKT1Q969V4 418 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 PPP1R12CQ9BZL4 782 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 TAB2Q9NYJ8 693 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 MAP3K21Q5TCX8 1036 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 G2E3Q7L622 706 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 LMBRD1Q9NUN5 540 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 WDR62O43379 1518 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 BLMP54132 1417 aaPredicted RBP19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 EXOC3O60645 756 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 CPA1P15085 419 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 IRX4P78413 519 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 SH2D4BQ5SQS7 431 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 SPATA5Q8NB90 893 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 ATP8A2Q9NTI2 1148 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 DCUN1D2Q6PH85 259 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 SEPT14Q6ZU15 432 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 GRK7Q8WTQ7 553 aa19.26■□□□□ 0.67
HMGXB3-206ENST00000613459 GEN1Q17RS7 908 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 NSMCE1Q8WV22 266 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 GCKRQ14397 625 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 ZBTB9Q96C00 473 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 H0YCG3 227 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 DNM2P50570 870 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 RASA3Q14644 834 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 RNF34Q969K3 372 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 FAM89AQ96GI7 184 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 DENND2CQ68D51 928 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 CLEC11AQ9Y240 323 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 RNF40O75150 1001 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 SLC1A4P43007 532 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 ATP2A3Q93084 1043 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 AMFRQ9UKV5 643 aa19.25■□□□□ 0.67
HMGXB3-206ENST00000613459 FAM227BQ96M60 508 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 GNPATO15228 680 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 REXO1Q8N1G1 1221 aaKnown RBP19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 MYCT1Q8N699 235 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 IFIH1Q9BYX4 1025 aaKnown RBP19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 CHMP2AO43633 222 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 APBA1Q02410 837 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 SND1Q7KZF4 910 aaKnown RBP eCLIP19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 AZI2Q9H6S1 392 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 TACC3Q9Y6A5 838 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 MAGEF1Q9HAY2 307 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 NCOA5Q9HCD5 579 aaKnown RBP19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 SAR1BQ9Y6B6 198 aa19.24■□□□□ 0.67
HMGXB3-206ENST00000613459 PNMA8AQ86V59 439 aaPredicted RBP19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 PCP11498 1178 aaKnown RBP19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 OR8K1Q8NGG5 319 aa19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 USP19O94966 1318 aa19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 MAP2K2P36507 400 aa19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 MYSM1Q5VVJ2 828 aa19.23■□□□□ 0.67
HMGXB3-206ENST00000613459 MIS12Q9H081 205 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms