RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 GAKO14976 1311 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 GOLGA6L19H0YKK7 550 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
COPS7B-223ENST00000611614 SBK1Q52WX2 424 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 MICU3Q86XE3 530 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
COPS7B-223ENST00000611614 TIAM2Q8IVF5 1701 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 A0A1B0GVL5 298 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 RXRAP19793 462 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 PTGS1P23219 599 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 KRT40Q6A162 431 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 DRC7Q8IY82 874 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 UBAC1Q9BSL1 405 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 MXD3Q9BW11 206 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 DAGLAQ9Y4D2 1042 aa15.98■□□□□ 0.15
COPS7B-223ENST00000611614 CYP2D7A0A087X1C5 515 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 NDUFA8P51970 172 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 NTRK3Q16288 839 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 SARM1Q6SZW1 724 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 HHIPL2Q6UWX4 724 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 TSC1Q92574 1164 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 AIFM3Q96NN9 605 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 TACC3Q9Y6A5 838 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 DLEC1Q9Y238 1755 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
COPS7B-223ENST00000611614 SCNN1DP51172 638 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 KIAA0825Q8IV33 1275 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 PHKBQ93100 1093 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 SDF4Q9BRK5 362 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 KCNQ5Q9NR82 932 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 FAM217BQ9NTX9 383 aaPredicted RBP15.97■□□□□ 0.15
COPS7B-223ENST00000611614 SLC12A7Q9Y666 1083 aa15.97■□□□□ 0.15
COPS7B-223ENST00000611614 MYH2Q9UKX2 1941 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 CCDC69A6NI79 296 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 RANBP6O60518 1105 aaKnown RBP15.96■□□□□ 0.15
COPS7B-223ENST00000611614 ZSCAN20P17040 1043 aaPredicted RBP15.96■□□□□ 0.15
COPS7B-223ENST00000611614 DACT2Q5SW24 774 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 CCDC186Q7Z3E2 898 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 MAPKAPK5Q8IW41 473 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 TMTC2Q8N394 836 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 FEZ1Q99689 392 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 ARID3AQ99856 593 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 ZNF287Q9HBT7 754 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.15
COPS7B-223ENST00000611614 STK36Q9NRP7 1315 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 SNED1Q8TER0 1413 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 NEMFO60524 1076 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 USP17L8P0C7I0 530 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.15
COPS7B-223ENST00000611614 SLC39A14Q15043 492 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 AXDND1Q5T1B0 1012 aaPredicted RBP15.96■□□□□ 0.15
COPS7B-223ENST00000611614 IQCA1Q86XH1 822 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 CEP57L1Q8IYX8 460 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 PAXBP1Q9Y5B6 917 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 CHD4Q14839 1912 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
COPS7B-223ENST00000611614 NID2Q14112 1375 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 CMA1P23946 247 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 MRIQ9BWK5 157 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
COPS7B-223ENST00000611614 BECN2A8MW95 431 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 HDLBPQ00341 1268 aaKnown RBP15.95■□□□□ 0.14
COPS7B-223ENST00000611614 SSRP1Q08945 709 aaKnown RBP15.95■□□□□ 0.14
COPS7B-223ENST00000611614 TRIM29Q14134 588 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 WTAPQ15007 396 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 C12orf60Q5U649 245 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 DHX40Q8IX18 779 aaKnown RBP15.95■□□□□ 0.14
COPS7B-223ENST00000611614 MYL10Q9BUA6 226 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
COPS7B-223ENST00000611614 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
COPS7B-223ENST00000611614 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
COPS7B-223ENST00000611614 CRKP46108 304 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 NT5C2P49902 561 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 RHBDL3P58872 404 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
COPS7B-223ENST00000611614 SLC4A8Q2Y0W8 1093 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 MKNK2Q9HBH9 465 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 SPON1Q9HCB6 807 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 KIAA1468Q9P260 1216 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 CLIP2Q9UDT6 1046 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 ORC4O43929 436 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 PRDM1O75626 825 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 FMNL1O95466 1100 aaPredicted RBP15.94■□□□□ 0.14
COPS7B-223ENST00000611614 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.141e-6■■■□□ 16.3
COPS7B-223ENST00000611614 PTGER2P43116 358 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
COPS7B-223ENST00000611614 WASF1Q92558 559 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms