RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 JAG1P78504 1218 aa25.85■■□□□ 1.73
SNRNP70-209ENST00000601065 APOA5Q6Q788 366 aa25.85■■□□□ 1.73
SNRNP70-209ENST00000601065 TMEM179Q6ZVK1 233 aa25.85■■□□□ 1.73
SNRNP70-209ENST00000601065 GLIS2Q9BZE0 524 aaPredicted RBP25.85■■□□□ 1.73
SNRNP70-209ENST00000601065 SLKQ9H2G2 1235 aaPredicted RBP25.85■■□□□ 1.73
SNRNP70-209ENST00000601065 STX8Q9UNK0 236 aa25.85■■□□□ 1.73
SNRNP70-209ENST00000601065 GH2P01242 217 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 PDIA3P30101 505 aaKnown RBP25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 CAP2P40123 477 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 LDHDQ86WU2 507 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 ZNF341Q9BYN7 854 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 SLC12A7Q9Y666 1083 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 GUCY1A2P33402 732 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 CABP5Q9NP86 173 aa25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 NAP1L2Q9ULW6 460 aaPredicted RBP25.84■■□□□ 1.73
SNRNP70-209ENST00000601065 STK3Q13188 491 aa25.83■■□□□ 1.73
SNRNP70-209ENST00000601065 MAP1SQ66K74 1059 aaPredicted RBP25.83■■□□□ 1.73
SNRNP70-209ENST00000601065 CLEC10AQ8IUN9 316 aa25.83■■□□□ 1.73
SNRNP70-209ENST00000601065 CDCA5Q96FF9 252 aa25.83■■□□□ 1.73
SNRNP70-209ENST00000601065 GOLGA8BA8MQT2 603 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 CUL4AQ13619 759 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 SEPT2Q15019 361 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 ZNF654Q8IZM8 581 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 KANSL2Q9H9L4 492 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 ZNF112Q9UJU3 913 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 FZD1Q9UP38 647 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 HPS5Q9UPZ3 1129 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 PFKFB2O60825 505 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 TTLL1O95922 423 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 ST3GAL1Q11201 340 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 NECAB1Q8N987 351 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 TMEM47Q9BQJ4 181 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 MYL10Q9BUA6 226 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 ZBTB21Q9ULJ3 1066 aa25.82■■□□□ 1.72
SNRNP70-209ENST00000601065 ATAD5Q96QE3 1844 aa25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 CTNND1O60716 968 aaKnown RBP25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 RAB3GAP1Q15042 981 aa25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 PPP4R3BQ5MIZ7 849 aa25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 RAB11FIP4Q86YS3 637 aa25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 GTF3C6Q969F1 213 aa25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 KAT14Q9H8E8 782 aa25.81■■□□□ 1.72
SNRNP70-209ENST00000601065 ZBTB43O43298 467 aa25.8■■□□□ 1.72
SNRNP70-209ENST00000601065 SCRN1Q12765 414 aa25.8■■□□□ 1.72
SNRNP70-209ENST00000601065 SYNE3Q6ZMZ3 975 aa25.8■■□□□ 1.72
SNRNP70-209ENST00000601065 CATIPQ7Z7H3 387 aa25.8■■□□□ 1.72
SNRNP70-209ENST00000601065 MICU3Q86XE3 530 aa25.8■■□□□ 1.72
SNRNP70-209ENST00000601065 KLRG1Q96E93 195 aa25.8■■□□□ 1.72
SNRNP70-209ENST00000601065 ASNSP08243 561 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 TOP1P11387 765 aaKnown RBP25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 RXRAP19793 462 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 RCAN1P53805 252 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 ICA1Q05084 483 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 CCDC83Q8IWF9 413 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 PNMA1Q8ND90 353 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 WRNIP1Q96S55 665 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 CLIP2Q9UDT6 1046 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 MYH4Q9Y623 1939 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 INPP5BP32019 993 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 CCT2P78371 535 aaKnown RBP25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 TROAPQ12815 778 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 NYAP2Q9P242 653 aa25.79■■□□□ 1.72
SNRNP70-209ENST00000601065 USP2O75604 605 aaPredicted RBP25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 DDAH1O94760 285 aa25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 EEF2P13639 858 aaKnown RBP25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 NF2P35240 595 aa25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 METAP2P50579 478 aaKnown RBP eCLIP25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 PRKG1Q13976 671 aa25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 SIAH1Q8IUQ4 282 aa25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 NID2Q14112 1375 aa25.78■■□□□ 1.72
SNRNP70-209ENST00000601065 PPP1R12BO60237 982 aaPredicted RBP25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 NUP133Q8WUM0 1156 aa25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 NCOA5Q9HCD5 579 aaKnown RBP25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 GINM1Q9NU53 330 aa25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 DOCK1Q14185 1865 aa25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 CCDC144CPQ8IYA2 1237 aa25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.77■■□□□ 1.727e-66■■■■□ 25.2
SNRNP70-209ENST00000601065 MKL1Q969V6 931 aa25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 INTS4Q96HW7 963 aaKnown RBP25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 GPBP1L1Q9HC44 474 aaPredicted RBP25.77■■□□□ 1.72
SNRNP70-209ENST00000601065 GOLGA8AA7E2F4 631 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 TRAF5O00463 557 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 CALM1P0DP23 149 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 CALM2P0DP24 149 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 CALM3P0DP25 149 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 ATP2B2Q01814 1243 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 SCYL3Q8IZE3 742 aa25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 LRRC47Q8N1G4 583 aaKnown RBP25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 ZKSCAN4Q969J2 545 aaPredicted RBP25.76■■□□□ 1.71
SNRNP70-209ENST00000601065 PAPPA2Q9BXP8 1791 aa25.75■■□□□ 1.71
SNRNP70-209ENST00000601065 FANCBQ8NB91 859 aa25.75■■□□□ 1.71
SNRNP70-209ENST00000601065 CDC27P30260 824 aa25.74■■□□□ 1.71
SNRNP70-209ENST00000601065 FAM217BQ9NTX9 383 aaPredicted RBP25.74■■□□□ 1.71
SNRNP70-209ENST00000601065 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.74■■□□□ 1.71
SNRNP70-209ENST00000601065 OTOFQ9HC10 1997 aa25.73■■□□□ 1.71
SNRNP70-209ENST00000601065 ADD1P35611 737 aaKnown RBP25.73■■□□□ 1.71
SNRNP70-209ENST00000601065 DDIT3P35638 169 aa25.73■■□□□ 1.71
SNRNP70-209ENST00000601065 FMR1Q06787 632 aaKnown RBP eCLIP25.73■■□□□ 1.713e-8■■□□□ 11.4
SNRNP70-209ENST00000601065 RTN1Q16799 776 aa25.73■■□□□ 1.71
SNRNP70-209ENST00000601065 NOL9Q5SY16 702 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms